BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_F22 (805 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.10 AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 33 0.18 AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical ... 30 1.7 AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 29 3.9 >U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical protein F31A9.6 protein. Length = 358 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = -1 Query: 670 SKLSLRNK---VTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCR 530 +K S NK + LYKT IRP + Y +VV + ++ K+++ +Q+ F R Sbjct: 210 NKYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259 >AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical protein K09H9.4 protein. Length = 328 Score = 33.5 bits (73), Expect = 0.18 Identities = 20/82 (24%), Positives = 39/82 (47%) Frame = -1 Query: 775 GVTLDRGMTFPSPYKTVRXRAAFIXGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASV 596 G + + F +K A F ++ + +K + + LYKT IRP + Y +V Sbjct: 151 GFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKTFIRPRLEYGTV 207 Query: 595 VFAHAARTHLKSLQVIQSRFCR 530 V + ++ K+++ +Q+ F R Sbjct: 208 VSSPTKKSDEKAIESVQNAFTR 229 >AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical protein F58D5.5 protein. Length = 159 Score = 30.3 bits (65), Expect = 1.7 Identities = 21/59 (35%), Positives = 26/59 (44%) Frame = -3 Query: 674 SKQTVPPQ*GNSLQNLHTPRHDVRKRSVRSRSPHPLEIPSGYSITILQDSRRSALVP*E 498 S QT P GN Q PRH R+R +S SP L + S+ +R L P E Sbjct: 26 SHQTTPKSSGNPRQQQAQPRH--RQRKAQSSSPASLAAFASSSVCSSPSARNVPLPPVE 82 >AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical protein Y67D8A.1 protein. Length = 1020 Score = 29.1 bits (62), Expect = 3.9 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = -3 Query: 350 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171 G+ S+ K RH G S S + HH H+ + LAT + + +P + +P L Sbjct: 944 GRASSEKKKRHVGGSSS--SSQHHHHHQQQQTPLLRLATPLTPEPSSGTVTPRAITPSPL 1001 Query: 170 SGS 162 S S Sbjct: 1002 SSS 1004 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,125,196 Number of Sequences: 27780 Number of extensions: 359127 Number of successful extensions: 1003 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1002 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1966828226 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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