Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_F22
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 30 2.1
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 30 2.1
At2g38570.1 68415.m04738 expressed protein ; expression supporte... 29 3.6
At3g12690.3 68416.m01586 protein kinase, putative similar to vir... 28 8.3
At3g12690.2 68416.m01585 protein kinase, putative similar to vir... 28 8.3
At3g12690.1 68416.m01584 protein kinase, putative similar to vir... 28 8.3
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 28 8.3
At2g25605.1 68415.m03067 expressed protein 28 8.3
At1g12330.1 68414.m01425 expressed protein 28 8.3
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -3
Query: 404 EPSHRSRWKLHTRPSRPNGKPSTS-PKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKG 228
+ H K H +R + K S K +H SS + H+HR SS+
Sbjct: 651 DKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDS 710
Query: 227 STSELTHRHSPLSFSPDL 174
S +E HRH S D+
Sbjct: 711 SDNEGEHRHRSSKHSKDV 728
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -3
Query: 404 EPSHRSRWKLHTRPSRPNGKPSTS-PKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKG 228
+ H K H +R + K S K +H SS + H+HR SS+
Sbjct: 651 DKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDS 710
Query: 227 STSELTHRHSPLSFSPDL 174
S +E HRH S D+
Sbjct: 711 SDNEGEHRHRSSKHSKDV 728
>At2g38570.1 68415.m04738 expressed protein ; expression supported
by MPSS
Length = 302
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 202 CLWVSSLVEPFVASDGF-DEDGDRCLWCLKAPLMDQED 312
C W+ S PF+ F ++ D + CL + L ++ED
Sbjct: 41 CFWIDSKNSPFLGQFSFIEKPRDNFICCLSSSLSNEED 78
>At3g12690.3 68416.m01586 protein kinase, putative similar to viroid
symptom modulation protein [Lycopersicon esculentum]
gi|7672777|gb|AAF66637
Length = 577
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 275 KHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLS 168
KH+ P S P +T+G+ SE +H+ S D L+
Sbjct: 56 KHQPPKSLEPPPSTRGTNSEGDLKHNTYSSDGDSLA 91
>At3g12690.2 68416.m01585 protein kinase, putative similar to viroid
symptom modulation protein [Lycopersicon esculentum]
gi|7672777|gb|AAF66637
Length = 577
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 275 KHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLS 168
KH+ P S P +T+G+ SE +H+ S D L+
Sbjct: 56 KHQPPKSLEPPPSTRGTNSEGDLKHNTYSSDGDSLA 91
>At3g12690.1 68416.m01584 protein kinase, putative similar to viroid
symptom modulation protein [Lycopersicon esculentum]
gi|7672777|gb|AAF66637
Length = 577
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 275 KHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLS 168
KH+ P S P +T+G+ SE +H+ S D L+
Sbjct: 56 KHQPPKSLEPPPSTRGTNSEGDLKHNTYSSDGDSLA 91
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = -3
Query: 422 EGGTT*EPSHRSRWKLHTRPSRPNGKPSTS-------PKARHYGSS*SINGAFRHHKHRS 264
+GG T + S+R++ T+P+ P+ + + P S S + A ++R
Sbjct: 298 QGGETAKSSNRNKLNSSTKPNTPSASSTATRNPRKKRPIPSSIKSKSSDDEAKSSERNRR 357
Query: 263 PSSSNPSLATKGSTSELTHRHS 198
PS + PS++ + S T R S
Sbjct: 358 PSIARPSVSDDETLSSSTARRS 379
>At2g25605.1 68415.m03067 expressed protein
Length = 200
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 445 SASLRHFEKAARHENPLIVAAGNYIPD--PVDRMVNRRRRP 329
SA+++HF R L+ A+ + +PD D + +RR+RP
Sbjct: 16 SANVKHFNGYGRLNRNLVRASSSDVPDFLSADWLESRRKRP 56
>At1g12330.1 68414.m01425 expressed protein
Length = 505
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 114 PSKSSASLNLPPXSETRPTEKIRRETQWAVSM 209
P SSA+ LPP S + RE QW +++
Sbjct: 147 PKPSSATAALPPRSSSSSAADASREEQWRLAV 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,397,943
Number of Sequences: 28952
Number of extensions: 338556
Number of successful extensions: 1054
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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