BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_F21 (823 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 130 1e-30 Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 2.3 Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 2.3 Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 2.3 AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 2.3 Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 3.0 Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.0 Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.0 AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.0 AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 3.0 U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.0 AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.0 U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 9.3 AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 9.3 AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 9.3 >Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical protein B0393.1 protein. Length = 276 Score = 130 bits (314), Expect = 1e-30 Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 5/104 (4%) Frame = -3 Query: 665 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCN 486 PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN Sbjct: 105 PGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCN 164 Query: 485 TKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFF 369 K SIGLMWW+LARE+L LRG + R + +++ DL+F Sbjct: 165 NKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYF 208 Score = 70.5 bits (165), Expect = 1e-12 Identities = 32/51 (62%), Positives = 38/51 (74%) Frame = -2 Query: 810 KXFLAARAVVAIENPXDVXVXSSRPFGQRAVLKFXAHTGXTXIAGRFTXRC 658 K LAARA+ A+ENP DV V S+RP+ QRA+LKF AHTG T I GRF+ C Sbjct: 57 KLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGC 107 >Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical protein C47D12.1c protein. Length = 4053 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -1 Query: 682 CGTFHXQVLLLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518 CG+ H + + + +LHS+NL + LYW L + + + S F+ +LC H Sbjct: 3336 CGS-HEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388 >Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein C47D12.1b protein. Length = 4061 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -1 Query: 682 CGTFHXQVLLLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518 CG+ H + + + +LHS+NL + LYW L + + + S F+ +LC H Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399 >Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein C47D12.1a protein. Length = 4064 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -1 Query: 682 CGTFHXQVLLLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518 CG+ H + + + +LHS+NL + LYW L + + + S F+ +LC H Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399 >AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. Length = 4064 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = -1 Query: 682 CGTFHXQVLLLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518 CG+ H + + + +LHS+NL + LYW L + + + S F+ +LC H Sbjct: 3347 CGS-HEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399 >Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical protein ZK1098.10d protein. Length = 1185 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -3 Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF*P 363 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 362 *XLKKVKRMNNKP 324 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical protein ZK1098.10b protein. Length = 1157 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -3 Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF*P 363 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 362 *XLKKVKRMNNKP 324 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical protein ZK1098.10a protein. Length = 1139 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -3 Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF*P 363 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 534 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 591 Query: 362 *XLKKVKRMNNKP 324 +KK K N++P Sbjct: 592 ASMKKTKTSNHRP 604 >AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. Length = 1157 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = -3 Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF*P 363 +L N ++ + V I + C + L W VLR G +W V ++F P Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609 Query: 362 *XLKKVKRMNNKP 324 +KK K N++P Sbjct: 610 ASMKKTKTSNHRP 622 >AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical protein F39C12.4 protein. Length = 103 Score = 29.5 bits (63), Expect = 3.0 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -1 Query: 214 CCTRCSSCFWSTPCSRRMVCP 152 CCT CF ST CS VCP Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72 >U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical protein C25F6.8 protein. Length = 188 Score = 28.3 bits (60), Expect = 7.0 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -3 Query: 536 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 429 CNTD+ R + CNT + +G+ + L+AR ++ Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81 >AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical protein Y45F3A.8 protein. Length = 404 Score = 28.3 bits (60), Expect = 7.0 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -2 Query: 564 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 457 +C+HS + K CGHC PM +HQ P + D Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380 >U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +3 Query: 165 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 260 L+EQ ++ +++L+R A R+LQP + PLA F Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624 >AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical protein Y40H7A.11 protein. Length = 124 Score = 27.9 bits (59), Expect = 9.3 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 485 TKSSHSIGLMWWLLA 441 T+ H IG+MWWL A Sbjct: 72 TRVEHKIGIMWWLCA 86 >AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. Length = 1829 Score = 27.9 bits (59), Expect = 9.3 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +3 Query: 165 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 260 L+EQ ++ +++L+R A R+LQP + PLA F Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,981,325 Number of Sequences: 27780 Number of extensions: 336152 Number of successful extensions: 896 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 896 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2029935014 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -