Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_F14
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 33 0.20
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 0.28
SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35) 33 0.36
SB_8398| Best HMM Match : Neuromodulin (HMM E-Value=8.4) 32 0.62
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_31376| Best HMM Match : CLN3 (HMM E-Value=5.5e-06) 31 1.1
SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14) 30 2.5
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 3.3
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 29 3.3
SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 29 4.4
SB_8828| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 29 5.8
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_36176| Best HMM Match : SEA (HMM E-Value=0.21) 28 7.7
SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35) 28 7.7
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 28 7.7
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = -2
Query: 361 VGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTE 182
V + N+D D + + E N G E N D D E++ +D+D E
Sbjct: 380 VSEETNDDEDEDEEEEEEEENEDEENGEDEENGEDEENEENGEDDDDEEEEEEDSDESEE 439
Query: 181 VDKVENVPAPDETYGPKIPDNFKPN 107
+ +E P+ T PK+ P+
Sbjct: 440 SEYLEEQPSRRSTVRPKVRPTALPS 464
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = -2
Query: 379 DSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKD 200
D D++ + ++N R+ N ER++ R I + I+ + PDKD Q+P++
Sbjct: 321 DPRDKERRERRDNSRENQVRRDNDERDHPQDR-IRGRREEKPIDPNRGPDKDREPQRPRE 379
Query: 199 ADGQTEVDKVENVPAPDETYGPKIPDNFKPNLASQTCKQ 83
+ + D+ PA D+ K D + + T +Q
Sbjct: 380 SRPRERADRCAGPPAHDKRVRSKELDQSEERAENGTERQ 418
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 29.9 bits (64), Expect(2) = 0.28
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 271 NIDFH-EINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPDETYGP-KIPDNFKPNL 104
N DF +S K KD ++K K+ + DK+ N P E P K+P + NL
Sbjct: 138 NDDFALSASSGKNKKKDKKDKKQKNKIDDDKEDKLTNTSTPSENVSPDKLPSDHGNNL 195
Score = 21.8 bits (44), Expect(2) = 0.28
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 478 LKESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDED 362
LKE +++K T ++F +D+ + ++ +D D
Sbjct: 101 LKEPDESKTTQSAAPPTASRFQALDIEEPAEEANDDDND 139
>SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)
Length = 974
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -2
Query: 370 DEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANI-DFHEINSWKRPDKDVHEQKPKDAD 194
D D T + DF AP + N +P F D + N+ PD V P D +
Sbjct: 815 DPDDTVTAPDPEDFNTAPAPEDFNTAPDLDDFDTAPDLDDFNTAYDPDDIVMASDPDDIN 874
Query: 193 GQTEVDKVENVPAPDETYGPKIPDNFK 113
+ D + PD+ PD+ K
Sbjct: 875 TARDPDDIVTASDPDDVNTASDPDDIK 901
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -2
Query: 367 EDVGQTKNNDRDFADAPKNLERNNS-PPRGIFANIDFHEINSWKRPDKDVHEQKPKDADG 191
ED + D DF AP + N + P I D +IN+ + PD V P D +
Sbjct: 835 EDFNTAPDLD-DFDTAPDLDDFNTAYDPDDIVMASDPDDINTARDPDDIVTASDPDDVNT 893
Query: 190 QTEVDKVENVPAPDE 146
++ D ++ PD+
Sbjct: 894 ASDPDDIKTASDPDD 908
>SB_8398| Best HMM Match : Neuromodulin (HMM E-Value=8.4)
Length = 234
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = -2
Query: 475 KESEQNKNEGVQVTETINKFDKID---LYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLE 305
K+ E ++N+ QV N+ D++D + KS+ ++ +E + G + + + P++L
Sbjct: 19 KDMELSENDDKQVKPDQNRTDQMDSSHVEKSVEINKNETKASGFCNESVENTGNDPESLH 78
Query: 304 RNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTE 182
+ N+ + + HE R DKD + K +TE
Sbjct: 79 KINTDKTNPDKSENTHENQRQNRNDKDPYYVKTGAIAMETE 119
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 31.9 bits (69), Expect = 0.62
Identities = 27/146 (18%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Frame = -2
Query: 475 KESEQNKNE-GVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERN 299
KE++++K + + E ++K DK + + + E++ Q + + D + K +
Sbjct: 20 KENKEDKEKMDKEDKEEMDKQDKENKEDKEEMDKEDKEEMDQEEMDKEDKEEMDKEDKEE 79
Query: 298 NSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPDETYGP-KIPD 122
+D E++ + DK+ +Q+ D + + E+DK E E G ++
Sbjct: 80 MDQEEMDKEEMDQEEMDKEDKEDKEEMDQEEMDKEDKEEMDKEEMDKEDKEEMGKGEMDK 139
Query: 121 NFKPNLASQTCKQDVTLEIDSSSSSD 44
K + + K+++ E+D +
Sbjct: 140 EDKEEMDQEMDKEEMDQEMDKEMDKE 165
>SB_31376| Best HMM Match : CLN3 (HMM E-Value=5.5e-06)
Length = 416
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 305 LQILWRVREIAII-IFSLTDVFVFAVTEKYRFVQIDFIEFIYCLRH 439
LQ +++R + I+ + + +F+F +T YRF+ I F+ C H
Sbjct: 283 LQEFFKIRRMWILAVLDVVPIFLFLLTSWYRFITDYRIIFVICFAH 328
>SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14)
Length = 644
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 187 FDRPHLWAFVREHLYRVSSKSLFRGNRY*RKYHGAVNCSSP 309
+D+ L+ EH+Y +S+ L++G Y KY V +P
Sbjct: 383 YDKCSLYDNSTEHMYNISTLKLYKGESYIEKYGANVVWRTP 423
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = -2
Query: 355 QTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTEVD 176
+TK D+D DA + + + + + K+PD+D + +P+ A +T+
Sbjct: 613 RTKPQDQDKQDASRKTKTRKPQDQAARPRQASRKTKTSKQPDQDKQDARPRQASRKTKTS 672
Query: 175 KVEN 164
K ++
Sbjct: 673 KPQD 676
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.5 bits (63), Expect = 3.3
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 2/191 (1%)
Frame = -2
Query: 622 KEQVSFSGSKSL-NREPVKIDTRPVSVTSTSNKTELVGAPKRMTVAELFLKESEQNKNEG 446
KE++ FSG K + + E D R VTS + E G KR + + E N +
Sbjct: 387 KEKL-FSGLKGIVDSEESDEDDRGTKVTS---RREGGGEAKRKPKKRICVSSDEDNVSPK 442
Query: 445 VQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFA-N 269
+V +T NK D++ + K DSED++ + N+D + D N + + + N
Sbjct: 443 -KVKKT-NKKDEVIMKK-----DSEDDERSEEANDDNNNDDGDDNYDVDGDDKNEMEEDN 495
Query: 268 IDFHEINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDNFKPNLASQTC 89
+++ S + + +V K K A + + + DE P K + C
Sbjct: 496 GGANDVKSEEDSEIEV-PIKTKPAKSKKAFKLKSDDSSEDEESSDDGPRGSKSKKHKKRC 554
Query: 88 KQDVTLEIDSS 56
D E++ S
Sbjct: 555 VSDSDSELEDS 565
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = -2
Query: 379 DSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKD 200
+++ E + K+ D+ D P+++ + R + D E K+P+ D E KP+D
Sbjct: 169 ENKPEKKPKAKSEDKP-EDMPEDMPEDKPEYRPEYKPEDKPEKKPEKKPE-DKSEDKPED 226
Query: 199 ADGQTEVDKVENVPAPDETYGPKIPDNFKP 110
DK+E+ P + P+ KP
Sbjct: 227 KHKDKPEDKLEDKPEDKKEEKPEDNPEEKP 256
>SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 505 KRMTVAELFLKESEQNKNEGVQVTETINKFDKIDLYKSIFLSD-SEDEDVGQTKNNDRDF 329
KR+ E + + E+ + ++ FDK D+++ +S+ + +E T + D
Sbjct: 74 KRLKDPEKYKNQDERRGGSKSRSHHRLHAFDKYDVHRDTGVSEFASNESRSSTNEDTGDV 133
Query: 328 ADAPKNLERN 299
D K E+N
Sbjct: 134 IDVVKEAEKN 143
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = -2
Query: 379 DSEDEDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKD 200
D +D D G+ K+ DRD + K+ +R+ R D + K D+D ++ KD
Sbjct: 334 DKKDRDRGRNKDRDRD-KERDKDRDRDKERDREKDRERD---KDRDKERDRDKDREREKD 389
Query: 199 ADGQTEVDK 173
D + + DK
Sbjct: 390 RDKERDRDK 398
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 160 PAPDETYGPKIPDNFKPNLASQTCKQDVTLEIDSSSSSD 44
P+ E YGP +P + P ++S+ C +T+ S+ SD
Sbjct: 812 PSDTEAYGPALPQSSVP-VSSKQCVNTITISKVSAERSD 849
>SB_8828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 364 DVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPD 230
D+ +ND ADA L ++ +P G F D +++ R D
Sbjct: 16 DIQYRSSNDHSTADALSRLPQHRAPKDGYFDLADLYQVGGSSRVD 60
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = -2
Query: 373 EDEDVGQTKNNDRDFA-DAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDA 197
ED+ G+ K+ D + D P++ N + D E + +P+ D E KP+D
Sbjct: 14 EDKPEGKPKDKSEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPE-DKPEDKPEDK 72
Query: 196 DGQTEVDKVENVPAPDETYGPKIPDNFKPNLASQTCKQD 80
DK+E+ P P+ KP + +D
Sbjct: 73 PEDKPEDKLEDKPEDSSEEKPEDNPEDKPEYKPEDKPED 111
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 240 RDPIKMFTNKSPKMRTVKRKSIKSRMFRLPTKLTDLKYRIILNRT 106
RDP+ + P R + +R R P K TD +Y + N T
Sbjct: 160 RDPVNNSDTRDPVNNRDTRDPVNNRDTRYPVKYTDTRYPVNNNDT 204
>SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 274 ANIDFHEINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPD 149
AN +NS +PDK VH K + G + E +P P+
Sbjct: 460 ANNSSKPLNSATKPDKKVHRPK-EHCTGPEMIPGAETIPGPE 500
>SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 743 TFPXPGGANTEGKHSRATRRFXTPSFRNMESSVHXQRQLRERTSLVQWIK 594
+F G + GKH + + T + ++ Q QL +R SL W+K
Sbjct: 708 SFTTSGQSLLSGKHHKCGNKNCTSDILSAPLYLYIQMQLCQRESLKDWLK 757
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 202 DADGQTEVDKVENVPAPDETYG----PKIPDNFKPNLASQTCKQDVTLEIDSS 56
D DG D+ ++ TYG P IP+N L QT +D+ E+++S
Sbjct: 2020 DIDGGI-TDQTDSKEGSQPTYGRQYWPTIPNNMPTTLHDQTTPRDLLTELNAS 2071
>SB_36176| Best HMM Match : SEA (HMM E-Value=0.21)
Length = 242
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -2
Query: 304 RNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPK-DADGQTEVDKVENVPAPDETYGPKI 128
R P+ F + F S+ D E P T D ++V APD TYG
Sbjct: 143 REAGAPQKQFQHQTFDNPISFSSRAYDADEPNPAVTIPDMTPPDVTQSVTAPDATYGVAF 202
Query: 127 PD 122
PD
Sbjct: 203 PD 204
>SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35)
Length = 254
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 451 EGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFAD 323
+GV V E + + +D+ + L D D G T +D DF D
Sbjct: 7 DGVDVVEDVGLLEDVDVVDGVTLLDDIDVVDGVTLLDDVDFVD 49
>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
Length = 1235
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 788 SXIHGGPKRSWARDLTFPXPGGANTEGKHSRATRRFXTP 672
S HG P S ++ +P PG NT + ATR TP
Sbjct: 470 SEAHGHPLDSTVSNVMYPTPGAGNTP-TATEATRNNATP 507
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 508 PKRMTVAELFLKESEQNKNEGVQVTETINKFDKI-DLYKSIFLSDSEDEDVGQTKNNDRD 332
PK+ E ++ E N G+ E + + + + D +S ++ +E++DV + K+ +
Sbjct: 417 PKKKPNGESVTEDGEVNIEAGIANEEQVEQEEALNDSQRSGEINQAEEDDVDKDKDVEEK 476
Query: 331 FADAPKN 311
ADA N
Sbjct: 477 AADAIVN 483
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,535,887
Number of Sequences: 59808
Number of extensions: 463563
Number of successful extensions: 2045
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2022
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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