Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_F14
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 35 0.078
Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 30 1.7
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.9
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 29 3.9
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 29 3.9
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 29 3.9
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 29 3.9
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 29 3.9
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 29 3.9
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 29 3.9
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 29 3.9
AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical ... 28 6.8
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 28 8.9
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -2
Query: 367 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEI---NSWKRPDK-DVHEQKPK 203
+++GQ D D +N E +NSP IF + NS KRP VHE+KPK
Sbjct: 137 DEMGQLGEEDDDLMCKDENRENSNSPELDIFHDYSKEASPTRNSTKRPSTVSVHERKPK 195
>Z84712-1|CAB06545.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 229 KDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDNFKPNL 104
K+V E K ++ + E D+ E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVENPAEDDE-EDEEFPSQSYGPSIPSNFRPTV 104
>Z78419-8|CAB01706.1| 297|Caenorhabditis elegans Hypothetical
protein F26A3.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 229 KDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDNFKPNL 104
K+V E K ++ + E D+ E+ P ++YGP IP NF+P +
Sbjct: 65 KEVRE-KLQNVENPAEDDE-EDEEFPSQSYGPSIPSNFRPTV 104
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/98 (20%), Positives = 41/98 (41%)
Frame = -2
Query: 583 REPVKIDTRPVSVTSTSNKTELVGAPKRMTVAELFLKESEQNKNEGVQVTETINKFDKID 404
+ P T+ + T+ T P T L E+E+ + + ++V ++++ ++ID
Sbjct: 343 KAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLAENEELEKQAIEVMKSLDDEERID 402
Query: 403 LYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSP 290
K++ + +DE K + K E N P
Sbjct: 403 AEKNVEVQKRKDERNAARKRINNFLKMMQKARENKNKP 440
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = -2
Query: 532 NKTELVGAPKRMTVAELFLKE--SEQNKNEGVQVTETI---NKFDKIDLYKSIFLSDSED 368
N +E +P E F K+ S ++ + + E+I N +K + + + D ++
Sbjct: 107 NDSEKSESPIEEGEGETFEKKIISMDTSDDKLDIAESISVSNDTEKPEENEEKVVGDEDE 166
Query: 367 EDVGQTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQ 188
ED+ + +D D +APK + + D HE +S K +++P++ D
Sbjct: 167 EDIDDVQEDDED--EAPK---KKTKKAVSTSDDDDLHEDDSPKGGSVSDEKEEPENEDDT 221
Query: 187 TEVDKVENVPAP 152
E + V +P
Sbjct: 222 EEPENEVEVESP 233
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 469 SEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNNDRDFADAPKNLERNNSP 290
S +N E T N F+ + + I+L S DE+ + + D+P + E++ P
Sbjct: 347 SNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDDEPLEDISKATDSPHSSEKSQIP 406
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
F21G4.6 protein.
Length = 1885
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 432 SVTWTPSFLFCSDSFKNNSATVILLGAPTSSVLFDVDVTETGLVSILTGSRFSDFDPLNE 611
++ W F C F N AT +L SS+L + V E+ L LTG+ D D L E
Sbjct: 1025 AIDWKRYFEHCFSKFNNTKATHLLSKYADSSLLPN-RVEESDLDEELTGNDSVDIDNLLE 1083
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Frame = -2
Query: 517 VGAPKRMTVAELFLKESEQNKN--EGVQVTETINKFDKIDLY---KSI-FLSDSEDEDVG 356
V A K+ +V E E+E++ + + TE I+ F + + + L D+ ED
Sbjct: 347 VSAIKKSSVEETKTFETEKSPEVQKATEPTEKIDNFQSTPVTAVPRGVPNLVDTSSEDEE 406
Query: 355 QTKNNDRDFADAPKNLERNNSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTEVD 176
+ + K E P + + ++I +IN + D + ++ K+ D +
Sbjct: 407 EDVEIIKPIEQPEKASEVLVEPIKKVVSSI---KINGIEVKDVEKTKEDKKEVDSKPVAT 463
Query: 175 KVENVPAPDETYGPKIPDN 119
+++VP P + K+P+N
Sbjct: 464 NIQDVPTPIPSETSKVPEN 482
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 125 RYFRSVSFVGSRNILDFIDFRLTVRIFGLL--FVNIFIGSLPRVYFVEIDISENTTGR 292
R + + N+L FI F TVR +G + FV+I S VY + D+SEN G+
Sbjct: 95 RCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHI---STDEVY-GDSDLSENEQGK 148
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 52 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 111
Query: 556 PVSV 545
P +
Sbjct: 112 PADL 115
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 260 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 319
Query: 556 PVSV 545
P +
Sbjct: 320 PADL 323
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 69 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 128
Query: 556 PVSV 545
P +
Sbjct: 129 PADL 132
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 52 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 111
Query: 556 PVSV 545
P +
Sbjct: 112 PADL 115
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 69 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 128
Query: 556 PVSV 545
P +
Sbjct: 129 PADL 132
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 239 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 298
Query: 556 PVSV 545
P +
Sbjct: 299 PADL 302
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 260 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 319
Query: 556 PVSV 545
P +
Sbjct: 320 PADL 323
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 733 NPVARIQKENIQERPEDXXLRLFVTWSLQY-TXRDSFAKEQVSFSGSKSLNREPVKIDTR 557
N R++ EN+QE PED R LQ T + + F + + RE V++
Sbjct: 69 NTNTRVKSENLQEIPEDIANRTHGEVRLQSGTNKYCSQRGMTGFGSGRDVCREGVRVAQN 128
Query: 556 PVSV 545
P +
Sbjct: 129 PADL 132
>AL032632-4|CAA21584.1| 469|Caenorhabditis elegans Hypothetical
protein Y11D7A.8 protein.
Length = 469
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 172 VENVPAPDETYGPKIPDNFKPNLASQTCKQDVTLEIDSSSSSD 44
+E P+ D PKIP +++P++ S + ++ S + SD
Sbjct: 53 IEPSPSSDVPSDPKIPTSYRPSIISLQIPNEFGDDVSSDALSD 95
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.9 bits (59), Expect = 8.9
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = -2
Query: 475 KESEQNKNEGVQVTETINKFDKIDLYKSIFLSDSEDEDVGQTKNND-RDFADAPKNLERN 299
K++ Q E + +T+ +F +++ L E E + + +++ RD + KNL
Sbjct: 608 KKAHQKMLEADNLRKTV-EFSNMEMTNVKALMAMEREQILEERHSTVRDLEEKLKNLTMT 666
Query: 298 NSPPRGIFANIDFHEINSWKRPDKDVHEQKPKDADGQTEVDKVENVPAPDETYGPKIPDN 119
+S + + A S R +D EQ ++ Q E D++ D+ ++ +
Sbjct: 667 SSINKNLLAEAR----RSIARLTEDAKEQ----SEAQ-EFDRLRWNDQVDQL--KEVNEE 715
Query: 118 FKPNLASQTCKQ--DVTLEIDSSSSSDCWVDANE 23
K NL + + D DSSS SDC D+++
Sbjct: 716 LKKNLGVEVLESSDDSDCSSDSSSDSDCSSDSSD 749
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,840,903
Number of Sequences: 27780
Number of extensions: 364012
Number of successful extensions: 1377
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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