Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_F13
         (778 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l...    99   6e-20
UniRef50_Q5XL24 Cluster: pH-response transcription factor pacC/R...    39   0.12 
UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,...    35   2.0  
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R...    34   3.4  
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing...    34   4.6  
UniRef50_UPI0000614A22 Cluster: Kelch repeat and BTB domain-cont...    33   8.0  
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo...    33   8.0  
UniRef50_Q8N4N3 Cluster: Kelch repeat and BTB domain-containing ...    33   8.0  

>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
           latent virus|Rep: Coat protein - Bombyx mori Macula-like
           latent virus
          Length = 237

 Score =   99 bits (238), Expect = 6e-20
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = -3

Query: 650 YTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 510
           YTNHPRLNIHFHQS DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG
Sbjct: 191 YTNHPRLNIHFHQSADAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 237



 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = -2

Query: 732 GXLALMHQAXLPCDXGYINPIIKSP 658
           G LALMHQA LPCD GYINPIIKSP
Sbjct: 164 GGLALMHQATLPCDLGYINPIIKSP 188


>UniRef50_Q5XL24 Cluster: pH-response transcription factor
           pacC/RIM101; n=15; Pezizomycotina|Rep: pH-response
           transcription factor pacC/RIM101 - Aspergillus giganteus
          Length = 678

 Score = 39.1 bits (87), Expect = 0.12
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -1

Query: 682 HQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 503
           H P  Q+P  H   T    ++  +P T       P L PP S+++ ++  +P S+     
Sbjct: 390 HSPPSQLPPSHATATTSAATMMSHPATHSPSTGTPALTPPSSAQSYTSGRSPISMSSAHR 449

Query: 502 VSPPY 488
           VSPP+
Sbjct: 450 VSPPH 454


>UniRef50_UPI0000EBDE35 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 135

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 712 SSXPPLRXRXHQPDH-QIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 542
           S+ P LR +     H  +P++H P  PD +    NP+TPY       + PP+ + AP+
Sbjct: 34  SNSPLLRPKARARTHISLPQYHRPPKPDFSLAPDNPVTPY-------VSPPVCTAAPA 84


>UniRef50_UPI0000D9C9FB Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Macaca mulatta|Rep: PREDICTED:
           hypothetical protein, partial - Macaca mulatta
          Length = 180

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -1

Query: 715 ASSXPPLRXRXHQ-PDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS--EAP 545
           +S  PP+     Q P    P    P +  L S+S  P+T    +F P L PP+SS  + P
Sbjct: 31  SSQFPPVTAPSSQFPPVSAPSSQFPRSVPLKSVSAPPVTASSSQFPPSLPPPVSSPGQCP 90

Query: 544 SAYLTP 527
           S+   P
Sbjct: 91  SSQSVP 96


>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
           OmpA/MotB precursor - Nitrobacter hamburgensis (strain
           X14 / DSM 10229)
          Length = 673

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -1

Query: 661 PRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 491
           P   TP  PD+T  S    P TP     +P   PP  + AP+A   P+     K  +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300


>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
           protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
           domain-containing protein 13B. - Takifugu rubripes
          Length = 634

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 261 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 148
           PSC F  PP  TVL    R  L++++  LL  +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543


>UniRef50_UPI0000614A22 Cluster: Kelch repeat and BTB
           domain-containing protein C16orf44.; n=1; Bos
           taurus|Rep: Kelch repeat and BTB domain-containing
           protein C16orf44. - Bos Taurus
          Length = 555

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +1

Query: 583 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 681
           R P STA G  W  M SLG  +Y IGG DD ++
Sbjct: 415 RRPMSTARG--WHSMCSLGDSIYSIGGSDDSLE 445


>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
           elongatus|Rep: Tll0286 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 158

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = -2

Query: 462 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 283
           L  LL+VIP  L   P +H +I  +  A NQ ++  +  + DN   T + +       + 
Sbjct: 8   LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67

Query: 282 TRVYVFDPSCYFSTP 238
            R+  F    +F  P
Sbjct: 68  LRLVGFPEQYHFRHP 82


>UniRef50_Q8N4N3 Cluster: Kelch repeat and BTB domain-containing
           protein C16orf44; n=25; Euteleostomi|Rep: Kelch repeat
           and BTB domain-containing protein C16orf44 - Homo
           sapiens (Human)
          Length = 616

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 583 RTPSSTASGD*WKWMLSLGWLVYGIGGFDDRVD 681
           R P +TA G  W  M SLG  +Y IGG DD ++
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIE 506


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,350,871
Number of Sequences: 1657284
Number of extensions: 14472348
Number of successful extensions: 40980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40884
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)