Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_F13
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 29 3.2
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 3.2
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 29 3.2
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 29 4.2
SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) 29 5.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 28 7.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 28 7.3
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -1
Query: 646 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDES 467
P TP S S P++P + P +P +PS LT + ++P + +V++E
Sbjct: 51 PKTPSEPSDSPGPMSPEPEIMTPTPEPSPKHRSPSPKLTKTPTPPSWSLTPLHDEVDEEE 110
Query: 466 QAS 458
+ S
Sbjct: 111 EGS 113
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 586 FAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLIS 446
FA P SS++PSA +P+S SP F + E + +IS
Sbjct: 1096 FATTTMSPTSSQSPSAVTSPTSPRSPSNPSPASFGFHSEDEPVTMIS 1142
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -2
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SLI 58
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S ++ +
Sbjct: 2292 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPQCKIVFEPHNIDNASPATVSRNGMVY 2349
Query: 57 LHSFGL 40
+ S GL
Sbjct: 2350 MSSSGL 2355
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -1
Query: 664 IPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 527
IPR H PTTP T + P T P +S+APSA TP
Sbjct: 271 IPRGHLPTTPSTTPQATPPST------TSQTTAPTASQAPSAGETP 310
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDS 91
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S
Sbjct: 1384 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPTCKVVFEPHNIDNAS 1430
>SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07)
Length = 592
Score = 28.7 bits (61), Expect = 5.5
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -2
Query: 357 YKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLK---DN 187
+ + + DN L T L +K+ G +VFD FDT+ +R + DN
Sbjct: 313 HSLTMIDNEL-TGDPLDIKMFEATG---WVFDEPGE-DNKKFDTIAPSTVRPKTREMTDN 367
Query: 186 KTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVK 73
+ L I+ SS++ R V R + SD VYVK
Sbjct: 368 QVPLEVGIIRQFPFSSDVQRMTVITRILGSDHMDVYVK 405
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 652 HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 491
+TP+TP S+ P TP P + PS TPS+ K S P
Sbjct: 277 NTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTP 330
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 652 HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 491
+TP+TP S+ P TP P + PS TPS+ K S P
Sbjct: 827 NTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTP 880
>SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 682 HQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 503
+QPD+Q+ F +PT +L S +N P F L+P A + L+ ++LG G
Sbjct: 91 NQPDYQLLAF-SPTGVELVSAELNNEEPSVNLFKNYLQPDRVRLADAMALSAAALGTSMG 149
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDS 91
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S
Sbjct: 2286 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPQCKVVFEPHNIDNAS 2332
>SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 963
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 649 TPTTPDLTSISINPLTPY 596
TPT PD+T +SI L PY
Sbjct: 75 TPTRPDVTQLSITGLKPY 92
>SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 623
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 682 HQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 503
+QPD+Q+ F +PT +L S +N P F L+P A + L+ ++LG G
Sbjct: 424 NQPDYQLLAF-SPTGVELVSAELNNEEPSVNLFKNYLQPDRVRLADAMALSAAALGTSMG 482
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 649 TPTTPDLTSISINPLTPY*KEFAPGL---KPPLSSEAPSAYLTPSSLGMXKGVSPP 491
TPTTP T+ + P P E P L PP+ + P+ TP++ +PP
Sbjct: 897 TPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPP 952
>SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 578
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 682 HQPDHQIPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 503
+QPD+Q+ F +PT +L S +N P F L+P A + L+ ++LG G
Sbjct: 481 NQPDYQLLAF-SPTGVELVSAELNNEEPSVNLFKNYLQPDRVRLADAMALSAAALGTSMG 539
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 640 TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQA 461
TP +S SI+ +P + L PP + P + LTP S + ++P +
Sbjct: 153 TPAGSSSSISLASPGMRSSLGSLTPPSRTSTPRSRLTPRSRSRSRTITPSTPSTTSSRAS 212
Query: 460 SR 455
SR
Sbjct: 213 SR 214
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 405 PLIEDVVMATNQAIIDYKVKIADNNLVTHKE 313
P + +V A N+ + V I DNN+V E
Sbjct: 2469 PAVVEVTFAANEVVATISVPIVDNNIVEETE 2499
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,821,570
Number of Sequences: 59808
Number of extensions: 442389
Number of successful extensions: 1190
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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