Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_F13
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p pro...    32   1.0  
AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    32   1.0  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   9.4  

>AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p
           protein.
          Length = 553

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = -1

Query: 712 SSXPPLRXRXHQPDHQI----PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
           S  PP R    QP   +    P    P +P+  SI++ P  PY    A G  PP+ S+ P
Sbjct: 439 SEVPPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-P 495

Query: 544 SAYLTPSSLGM 512
           SA L+ SS G+
Sbjct: 496 SA-LSASSAGI 505


>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
           protein.
          Length = 625

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = -1

Query: 712 SSXPPLRXRXHQPDHQI----PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
           S  PP R    QP   +    P    P +P+  SI++ P  PY    A G  PP+ S+ P
Sbjct: 511 SEVPPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-P 567

Query: 544 SAYLTPSSLGM 512
           SA L+ SS G+
Sbjct: 568 SA-LSASSAGI 577


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -1

Query: 646 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSP 494
           PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G SP
Sbjct: 413 PTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGPSP 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,247,247
Number of Sequences: 53049
Number of extensions: 675015
Number of successful extensions: 1828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)