Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_F06
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 233 1e-61
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 246
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 247 GLRKVACI 254
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 246
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 247 GLRKVACI 254
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 148
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 149 GLRKVACI 156
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1
Query: 622 GYKGVTSRWHTKKLPRKTHQG 560
G+KGVTSRWHTKKLPRKTH+G
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 246
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 247 GLRKVACI 254
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 148
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 149 GLRKVACI 156
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = -1
Query: 622 GYKGVTSRWHTKKLPRKTHQG 560
G+KGVTSRWHTKKLPRKTH+G
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -2
Query: 588 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 409
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 408 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 229
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 228 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 103
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = -3
Query: 740 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATP*DTPR 561
GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G + S H + P T +
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHK 246
Query: 560 VLGKLPAL 537
L K+ +
Sbjct: 247 GLRKVACI 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,730,090
Number of Sequences: 27780
Number of extensions: 418430
Number of successful extensions: 1103
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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