Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E23
(798 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 119 1e-25
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 109 6e-23
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 108 2e-22
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 105 1e-21
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 103 4e-21
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 98 2e-19
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 97 3e-19
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 97 3e-19
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 97 5e-19
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 97 5e-19
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 93 7e-18
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 93 1e-17
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 85 3e-15
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 83 6e-15
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 79 2e-13
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 71 3e-11
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 69 1e-10
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 68 2e-10
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 67 6e-10
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 66 1e-09
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 63 9e-09
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 61 4e-08
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 58 2e-07
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 57 4e-07
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 56 8e-07
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 55 2e-06
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 52 2e-05
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 50 7e-05
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 47 5e-04
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 46 8e-04
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 45 0.003
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 44 0.003
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 43 0.008
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 39 0.17
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 38 0.39
UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;... 37 0.67
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 35 2.1
UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA... 35 2.7
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 35 2.7
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 35 2.7
UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A4ASF7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 119 bits (286), Expect = 1e-25
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E N+P IALCNTDSPLR+VDIAIPCN K +HS+GLMWW+LAREVLR+RG + R
Sbjct: 132 QPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISR 191
Query: 405 DQRWDVVVDLFFYRXP 358
+ W+V+ DL+FYR P
Sbjct: 192 EHPWEVMPDLYFYRDP 207
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 109 bits (263), Expect = 6e-23
Identities = 46/76 (60%), Positives = 57/76 (75%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP IA CNT+SPLR++D+AIPCN +S+GLMWWLL REVLRLRG + R
Sbjct: 132 QPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISR 191
Query: 405 DQRWDVVVDLFFYRXP 358
+ W+V+ DLFFYR P
Sbjct: 192 ELPWEVMPDLFFYRDP 207
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 108 bits (259), Expect = 2e-22
Identities = 47/67 (70%), Positives = 54/67 (80%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP IA C+TD+PL FVDIAIPCN + +SI +M+WLLAREVLRLRG +PR WDV VD
Sbjct: 161 NIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWDVKVD 220
Query: 378 LFFYRXP 358
LFFYR P
Sbjct: 221 LFFYRDP 227
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 105 bits (253), Expect = 1e-21
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP IA C+TDSP+RFVDI IP N K HSIG ++WLLAR VL++RG +
Sbjct: 136 QPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAA 195
Query: 405 DQRWDVVVDLFFYRXP 358
Q+WDV+VDLFFYR P
Sbjct: 196 GQKWDVMVDLFFYREP 211
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 103 bits (248), Expect = 4e-21
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P ME N+P IALCNTDSPL +VDIAIPCN K +HS+G+MWW+L EV R+ G + R
Sbjct: 212 QPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMWWMLVPEVRRISGTISR 271
Query: 405 DQRWDVVVDLFFYRXP 358
+ W+V+ D FYR P
Sbjct: 272 EHPWEVMTDPCFYRDP 287
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 98.3 bits (234), Expect = 2e-19
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP IA C+TDSP+R+VDI IP N K +SIG ++WLLAR VL++RG +
Sbjct: 54 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILP 113
Query: 405 DQRWDVVVDLFFYRXP 358
+WDV+VDLFFYR P
Sbjct: 114 GHKWDVMVDLFFYRDP 129
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP IALC+TD+ L +VD IPCNTK+ +S+GL+ WLL REVLRLRG L R Q W V+ D
Sbjct: 139 NIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLRLRGALTRTQEWSVLPD 198
Query: 378 LFFYR 364
LFFYR
Sbjct: 199 LFFYR 203
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL-PRDQRWDVVV 382
NIP IAL + DSP FVD+AIPCN + HSIGL+W+LLAREVLRLRG L R Q W ++
Sbjct: 140 NIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMP 199
Query: 381 DLFFYRXP 358
DL+FYR P
Sbjct: 200 DLYFYRDP 207
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 97.1 bits (231), Expect = 5e-19
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
++P IALC+TDSPL +VDIAIPCN K SI LM+WLLAREVL LR L R WDV+VD
Sbjct: 141 SLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVD 200
Query: 378 LFFYRXP 358
FF+R P
Sbjct: 201 TFFWRDP 207
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 97.1 bits (231), Expect = 5e-19
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP IALC+TDS L VDIAIP N K SIGL+W+LLAREVLR+RG L R WDV+ D
Sbjct: 143 NIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPD 202
Query: 378 LFFYRXP 358
L+FYR P
Sbjct: 203 LYFYRDP 209
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 93.1 bits (221), Expect = 7e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP IA C+TDSPL+ VDIAIP N K+ SIG +++LLAR VL++RG +
Sbjct: 155 QPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISP 214
Query: 405 DQRWDVVVDLFFYRXP 358
WDV+VDLFFYR P
Sbjct: 215 ANPWDVMVDLFFYRDP 230
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 92.7 bits (220), Expect = 1e-17
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP I+LCN+D+ L+F+D+AIPCN K+ SIGL++WLLAREVLRL+G + R + WDV D
Sbjct: 146 NIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKPD 205
Query: 378 LF 373
LF
Sbjct: 206 LF 207
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 84.6 bits (200), Expect = 3e-15
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP IAL N+D+PL++VDI IP + + SI +++WLLAREV LRG L +D+ WDV+VD
Sbjct: 170 NIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGELNKDEEWDVLVD 229
Query: 378 LFFYR 364
LF+++
Sbjct: 230 LFYHK 234
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 83.4 bits (197), Expect = 6e-15
Identities = 41/74 (55%), Positives = 49/74 (66%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP I CNTDSPL+ VDI IPCN +SI LM W+LAREV R+ G+ PR
Sbjct: 132 QPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALMLWMLAREVRRIWGLDPR 190
Query: 405 DQRWDVVVDLFFYR 364
Q DV++DLF R
Sbjct: 191 SQPGDVIMDLFLMR 204
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = -1
Query: 585 KPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
+P E NIP IA C+ DSP+R+VDI I N K H+IG ++WLL VL +R +
Sbjct: 83 QPIKEVALGNIPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIAL 142
Query: 405 DQRWDVVVDLFF 370
+WDV+VDLFF
Sbjct: 143 GHKWDVMVDLFF 154
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 70.9 bits (166), Expect = 3e-11
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -1
Query: 465 GLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 358
GL+WWLLAREVLRLRG++PR+ +W+VVVDLFFYR P
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRDP 36
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 68.9 bits (161), Expect = 1e-10
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -1
Query: 474 HSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 358
HSIGLMWW+L+REVLRLRG + RD W+++VDL+F+R P
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDP 86
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 68.1 bits (159), Expect = 2e-10
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = -1
Query: 483 KSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 358
K +HS+GL+WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 42
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 66.9 bits (156), Expect = 6e-10
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVD 379
NIP I++CNTDS L ++DIAIP N K +S L+ WLL +++L +G L ++ W+V V+
Sbjct: 134 NIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALIIWLLTKKILIFKGELTKNCEWNVSVE 193
Query: 378 LF 373
F
Sbjct: 194 SF 195
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 409
IP IALC+TDSP+ VD+ IP N + ++ L++WLLAREVLR+RG +P
Sbjct: 143 IPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLRIRGDIP 191
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 62.9 bits (146), Expect = 9e-09
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDL 376
IP IAL +TDS F+D+ IPCN K +S+ L++WLLAR+VLR RG L ++ D+ V
Sbjct: 146 IPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELKPNE--DLPVSW 203
Query: 375 FFYRXP 358
+R P
Sbjct: 204 EEFRVP 209
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 62.1 bits (144), Expect = 2e-08
Identities = 22/46 (47%), Positives = 38/46 (82%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 421
N+P IA+CN+D+ L++VD AIPCN ++++SI ++W+LL + VL ++
Sbjct: 45 NLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDL 376
I +ALC+T+ ++D IP N + S S+ L++W+LARE LR RGV+ +D++ V V+
Sbjct: 133 ITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQLKVPVEE 192
Query: 375 F 373
F
Sbjct: 193 F 193
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDL 376
IP IALC+ ++ FVD+ IP N K S+ +++WLLARE+L+ RG + ++ +D
Sbjct: 135 IPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDD 194
Query: 375 F 373
F
Sbjct: 195 F 195
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDL 376
IP +A +TD+ + ++D+ IP N K S+ L++W LAR++LR R V+P D V V
Sbjct: 165 IPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVPVSE 224
Query: 375 FFYR 364
F R
Sbjct: 225 FEMR 228
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 56.4 bits (130), Expect = 8e-07
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = -1
Query: 603 TLHKTIKPXMEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRL 424
TL ++P + N+P IAL + DS DIA PCN K HS+GLM W+LA E L
Sbjct: 79 TLTDQVQPSLASQYVNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEALSF 137
Query: 423 RGVLPRDQRWDVVVDLFFYRXP 358
+ W D++FYR P
Sbjct: 138 LNT--HEWSWP---DVYFYRDP 154
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -1
Query: 456 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 358
WW+LAREVLR+RG + R+ W+V+ DL+FYR P
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 33
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQR 397
+P + LC+T+ F+D+ IP N K ++ L+++LL RE L+ RGV+ D +
Sbjct: 136 VPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVITDDTK 188
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 50.0 bits (114), Expect = 7e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRL 424
+P +ALC+T++ VD+ IP N K ++ L++WLLAREV RL
Sbjct: 166 VPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRL 209
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 409
IP IA+C++++ VD+ +P N K ++ +++WLLA E L RG P
Sbjct: 208 IPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRGAEP 256
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDL 376
IP I + N+D+ +D+ IP N + ++ ++WLLAREVL +RG + + +D
Sbjct: 139 IPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKYEIDD 198
Query: 375 F 373
F
Sbjct: 199 F 199
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -1
Query: 513 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRXP 358
FVDIAIP N + HS+ ++W LL R VLRL+G ++ +FFY P
Sbjct: 112 FVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG-----GDLSMMPGMFFYHDP 158
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLR 427
NIP I +CNTD+ + F+D +P NT S S ++++L+ R + R
Sbjct: 133 NIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYLIGRLLKR 176
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -1
Query: 576 MEXX*XNIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 418
ME N+ IAL N+ SPL + IAIP ++K +H++G WLLA VL G
Sbjct: 116 MEAPYVNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVGRRKWLLAWGVLHACG 168
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 43.2 bits (97), Expect = 0.008
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV--LRLRGVLPRDQRWDVV 385
N+P IA NTD+ L VDIAIP N +S +I +++L+R + ++ L RD +
Sbjct: 146 NLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTGAELVRDMK---E 202
Query: 384 VDLFFYR 364
V+LF +R
Sbjct: 203 VELFLFR 209
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -1
Query: 558 NIPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 418
NIP IAL NT++ + +D IP N S SI L+ +LA + L G
Sbjct: 232 NIPVIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAELHG 278
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 37.5 bits (83), Expect = 0.39
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPR 406
IP IA+CNT++ VD IP N S S+ L+ LL V +G LP+
Sbjct: 286 IPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLCDAVAEAKG-LPK 334
>UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 136
Score = 36.7 bits (81), Expect = 0.67
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 364 TVEEQINHNIPALVTGKHTTKPQHFTCQQPPHQ 462
+VE I H++P + TG T Q+F Q PPHQ
Sbjct: 102 SVEVGIRHDLPRVFTGNGATHAQNFLSQHPPHQ 134
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 35.1 bits (77), Expect = 2.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 426 LRGVLPRDQRWDVVVDLFFYRXP 358
+RG + +WDV+VDLFFYR P
Sbjct: 161 MRGTILPGHKWDVMVDLFFYRDP 183
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 230 RYRPACCTRCSSCFWST-PC--SRRMVCPGTR*VEHNCRRTSRRH 105
+ RP CTRC CF+ T C S R + G+ EHNCRR H
Sbjct: 367 KQRPLQCTRCY-CFYDTRACRSSERCISCGSSKQEHNCRRGGAVH 410
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV 415
IP +ALCNT++ VD IP N S L+ LLA V + +
Sbjct: 196 IPVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKAM 242
>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11321-PA, isoform A - Tribolium castaneum
Length = 2084
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 212 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRR 120
C +CSS F + P RR+VCP + V NCRR
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRR 1818
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 418
IP IALCNT+S + + IP N + S+ L+ LL V +G
Sbjct: 224 IPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDAVALAQG 269
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 34.7 bits (76), Expect = 2.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 555 IPXIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 439
IP I LC+TD + IPCN S S+ LM ++++
Sbjct: 396 IPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSK 434
>UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 523
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 136 STHLVPGQTILLEQGVLQKQELQRVQQAGRYLQPMKPLAPVF 261
S+H V L+E G+ Q + L+RV Q+GR++Q + PLA F
Sbjct: 431 SSHEVALDLSLMEYGIYQ-EALERVLQSGRFVQQVAPLAERF 471
>UniRef50_A4ASF7 Cluster: Putative uncharacterized protein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
uncharacterized protein - Flavobacteriales bacterium
HTCC2170
Length = 376
Score = 33.5 bits (73), Expect = 6.3
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = -3
Query: 634 FREPCFLIVLDPAQNHQTIXGGXIXQHSXDCFVQHRLPTKICGHCYPMQHQVFPLYWFD 458
F + C DPA + + G + + D F H + ++CG C + P +W D
Sbjct: 318 FIDACAETSPDPALLRKLLDDGTVMFYLTDGFQNHFVVNRVCGDCTVLGQSEVPEFWID 376
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,738,846
Number of Sequences: 1657284
Number of extensions: 10468951
Number of successful extensions: 25430
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 24610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25409
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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