Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_E17
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664...    31   1.4  
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873...    30   2.4  

>06_03_1455 +
           30264023-30264174,30265930-30266070,30266328-30266430,
           30266510-30266659,30267184-30267229,30267383-30267738
          Length = 315

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 579 IDGRRIRVDYSITQRAHTPTPGIYMG 502
           ++GR I V+ S   R  TPTPG Y+G
Sbjct: 173 MEGRNITVEKSRRGRPRTPTPGSYLG 198


>03_02_0472 -
           8737955-8738580,8738704-8738767,8739090-8739239,
           8739311-8739422,8739686-8739708
          Length = 324

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 579 IDGRRIRVDYSITQRAHTPTPGIYMG 502
           ++GR I V+ +  +R  TPTPG Y+G
Sbjct: 86  LEGRVITVEKAKRRRGRTPTPGRYLG 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,612,242
Number of Sequences: 37544
Number of extensions: 278864
Number of successful extensions: 495
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)