Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_E17
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    47   2e-05
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = -2

Query: 582 EIDGRRIRVDYSITQRAHTPTPGIYMG 502
           ++DG +IRVD+S+T+R H+PTPG YMG
Sbjct: 141 DLDGHKIRVDFSLTKRGHSPTPGQYMG 167


>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
            F48E3.3 protein.
          Length = 1493

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 692  VQVVIDAKTGRSPRVLLRYXEDMEDAKIAKNECTREW 582
            +QVVID+ TG+S RV +   E ME+  +  ++    W
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVW 1185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,113,839
Number of Sequences: 27780
Number of extensions: 240648
Number of successful extensions: 498
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)