Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E14
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 31 0.14
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.3
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 26 7.2
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 26 7.2
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.2
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.5
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.5
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.5
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 9.5
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = -2
Query: 709 KPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
+PPS A L + + P P P + + NP TP+ P + A + L
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303
Query: 529 PSSLGMXKGVSPPYFQV 479
P G+ G PY V
Sbjct: 304 P---GLKNGSDYPYLSV 317
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 100 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 228
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
PP PA ++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 725 FALMHQATLPCDXGYINPIIKSPIPYTNHP 636
F + HQA L C GY + + +P+ N P
Sbjct: 346 FIICHQAILRCIYGYYHNLSLEELPFINVP 375
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 255 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 160
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -3
Query: 354 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 175
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 174 LSASIQASLPSSEIYRQL 121
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -2
Query: 700 SPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 521
S L TST ++ +TP +S +N TP A PP++S TP +
Sbjct: 1610 SSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPIT 1669
Query: 520 LGMXKGVSPP 491
S P
Sbjct: 1670 SSTVVNTSTP 1679
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = -2
Query: 700 SPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 521
S L TST ++ +TP +S ++N TP P++S TP +
Sbjct: 1586 SSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPIT 1645
Query: 520 LGMXKGVSPP 491
SPP
Sbjct: 1646 SSTALNTSPP 1655
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 465 KLRALLVVIPRILRSPPPTHPLIEDV 388
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 378 TNQAIIHYKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCY 250
T++A++ Y + V H E LKV II T Y D S Y
Sbjct: 26 TSEALVRYPEIV-----VKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 7.2
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -2
Query: 655 FHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQV 479
FHTPT P T +S +P + + PLS +A S LT S L + SPP V
Sbjct: 139 FHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTSSPLKDFQS-SPPLSTV 195
Query: 478 NDESQA 461
+S +
Sbjct: 196 LQKSHS 201
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 142 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 44
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 470 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 384
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2
Query: 682 TSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 503
T T S+NP T I N + K F+ PP++++ P +L P+S K
Sbjct: 687 TVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPEYAKT 744
Query: 502 VSP 494
V P
Sbjct: 745 VIP 747
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 115 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 216
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2
Query: 709 KPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
+PPSP + R+S F +PT S+ + + G+ P SS A A+L+
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS-ASLAHLS 552
Query: 529 PSS 521
+S
Sbjct: 553 QAS 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,017,519
Number of Sequences: 5004
Number of extensions: 62347
Number of successful extensions: 254
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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