Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E14
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 30 2.5
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 30 2.5
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.3
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 3.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 29 4.4
SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) 29 5.8
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRF-HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
P +P+ T + S P +TP+TP S P+TP P P + AP +T
Sbjct: 679 PSTPSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITP----GTP--STPSTPSAPGTPIT 732
Query: 529 PSSLGMXKGVSPP 491
PS+L S P
Sbjct: 733 PSTLSTPSTPSTP 745
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 527
P +P+ T + S P TP+TP S P+TP P P + AP +TP
Sbjct: 132 PSTPSTPSTPSTPSTPS--TPSTPSTPSTPSTPITP----GTP--STPSTPSAPGTPITP 183
Query: 526 SSLGMXKGVSPP 491
S+L S P
Sbjct: 184 STLSTPSTPSTP 195
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/99 (27%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Frame = -2
Query: 784 HSXXGNXXXPLXXXAXIXXVSP-LCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINP 608
HS G P +P L P +P+ T + S P TP+TP S P
Sbjct: 428 HSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPS--TPSTPSTPSTPSTP 485
Query: 607 LTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 491
TP + P + PSA TP + S P
Sbjct: 486 STPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAP 524
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRF-HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
P +P+ T + S P TP+TP S P TP P + PS T
Sbjct: 84 PSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPST 143
Query: 529 PSSLGMXKGVSPP 491
PS+ S P
Sbjct: 144 PSTPSTPSTPSTP 156
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 527
P +P+ T + S P TP+TP S I P TP P + PS TP
Sbjct: 24 PSTPSTPRTPSTPSTPC--TPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTP 81
Query: 526 SSLGMXKGVSPP 491
S+ S P
Sbjct: 82 STPSTPSTPSTP 93
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 527
P +P+ T + P TP+TP S P TP P + PS TP
Sbjct: 512 PGTPSTPSTPSAPGTPS--TPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPSTP 569
Query: 526 SSL 518
S+L
Sbjct: 570 STL 572
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = -2
Query: 679 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 500
ST S+ TP+TP S P TP P + PS TPS+ M
Sbjct: 641 STPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTP 700
Query: 499 SPP 491
S P
Sbjct: 701 STP 703
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRF-HTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
P +P T + S P TP TP S P TP P + PS T
Sbjct: 57 PSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPST 116
Query: 529 PSSLGMXKGVSPP 491
PS+ S P
Sbjct: 117 PSTPSTPSTPSAP 129
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Frame = -2
Query: 712 IKPPSPAXLXTSTRSSNP----RFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
I P +P+ T + P TP+TP S P TP L P + P
Sbjct: 163 ITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMP 222
Query: 544 SAYLTPSSLGMXKGVSPP 491
+ TPS+ +S P
Sbjct: 223 NTPSTPSTPSTPSTLSTP 240
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Frame = -2
Query: 712 IKPPSPAXLXTSTRSSNP----RFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
I P +P+ T + P TP+TP S P TP L P + P
Sbjct: 713 ITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMP 772
Query: 544 SAYLTPSSLGMXKGVSPP 491
+ TPS+ +S P
Sbjct: 773 NTPSTPSTPSTPSTLSTP 790
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 586 FAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISR 443
FA P SS++PSA +P+S SP F + E + +IS+
Sbjct: 1096 FATTTMSPTSSQSPSAVTSPTSPRSPSNPSPASFGFHSEDEPVTMISK 1143
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -2
Query: 646 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDES 467
P TP S S P++P + P +P +PS LT + ++P + +V++E
Sbjct: 51 PKTPSEPSDSPGPMSPEPEIMTPTPEPSPKHRSPSPKLTKTPTPPSWSLTPLHDEVDEEE 110
Query: 466 QASRLISRHSTH--TPL 422
+ S + R S TPL
Sbjct: 111 EGSFVQFRCSPQRMTPL 127
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -2
Query: 709 KPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
+P + + + S+ PR H PTTP T + P T P +S+APSA T
Sbjct: 256 EPQTTISITSIISSAIPRGHLPTTPSTTPQATPPST------TSQTTAPTASQAPSAGET 309
Query: 529 P 527
P
Sbjct: 310 P 310
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -2
Query: 709 KPPSPAXLXTST--RSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 536
+PP+P T ++P + P+ ++T+ P P E + PP+ ++AP+
Sbjct: 31 QPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTV 90
Query: 535 LTPSSLGMXKGVSPP 491
P V PP
Sbjct: 91 PPPVVTDAPTTVPPP 105
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -3
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SLI 58
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S ++ +
Sbjct: 2292 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPQCKIVFEPHNIDNASPATVSRNGMVY 2349
Query: 57 LHSFGL 40
+ S GL
Sbjct: 2350 MSSSGL 2355
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 703 PSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTP 599
P+PA T T+ + P HTPTTP T+ + TP
Sbjct: 94 PTPATTPTPTKPT-PTAHTPTTPTPTAHTPTKPTP 127
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDS 91
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S
Sbjct: 1384 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPTCKVVFEPHNIDNAS 1430
>SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07)
Length = 592
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -3
Query: 357 YKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLK---DN 187
+ + + DN L T L +K+ G +VFD FDT+ +R + DN
Sbjct: 313 HSLTMIDNEL-TGDPLDIKMFEATG---WVFDEPGE-DNKKFDTIAPSTVRPKTREMTDN 367
Query: 186 KTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVK 73
+ L I+ SS++ R V R + SD VYVK
Sbjct: 368 QVPLEVGIIRQFPFSSDVQRMTVITRILGSDHMDVYVK 405
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -2
Query: 640 TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQA 461
TP +S SI+ +P + L PP + P + LTP S + ++P +
Sbjct: 153 TPAGSSSSISLASPGMRSSLGSLTPPSRTSTPRSRLTPRSRSRSRTITPSTPSTTSSRAS 212
Query: 460 SRLISRHSTHT 428
SR +R T
Sbjct: 213 SRGSARGGAKT 223
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 237 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDS 91
P D + +N+ +VL DNKT L+ + +P S + + +P ++ + S
Sbjct: 2286 PVDAIWIENLNSVLDDNKTLTLANGDR--IPMSPQCKVVFEPHNIDNAS 2332
>SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 963
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 649 TPTTPDLTSISINPLTPY 596
TPT PD+T +SI L PY
Sbjct: 75 TPTRPDVTQLSITGLKPY 92
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 649 TPTTPDLTSISINPLTPY*KEFAPGL---KPPLSSEAPSAYLTPSSLGMXKGVSPP 491
TPTTP T+ + P P E P L PP+ + P+ TP++ +PP
Sbjct: 897 TPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPP 952
>SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 703 PSPAXLXTSTRSSNPRFHTPTTPDLTS 623
PSP + T+ + ++H PTTP L S
Sbjct: 92 PSPNNIYTTITQQHQQYHHPTTPTLPS 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,888,423
Number of Sequences: 59808
Number of extensions: 485887
Number of successful extensions: 1454
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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