Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E14
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.072
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 35 0.072
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 32 0.39
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 31 0.89
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 0.89
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 30 1.6
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 3.6
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 3.6
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 3.6
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 4.7
At4g20200.1 68417.m02953 terpene synthase/cyclase family protein... 29 4.7
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 4.7
At5g49080.1 68418.m06074 proline-rich extensin-like family prote... 28 6.3
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 6.3
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 28 8.3
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 28 8.3
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 28 8.3
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 28 8.3
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 471 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIHYK-VKIADNNLVTHKELALKV 298
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 297 SSIIGTRVYVFDPSC 253
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -2
Query: 679 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 500
+T +S P + +P TP S S P ++AP KP + S P Y TPS K
Sbjct: 18 ATVTSYP-YSSPQTPSYNSPSYEHKGP---KYAPHPKPYVKSSPPPQYYTPSPKVNYKSP 73
Query: 499 SPPY 488
PPY
Sbjct: 74 PPPY 77
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -2
Query: 679 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 500
+T +S P + +P TP S S P ++AP KP + S P Y TPS K
Sbjct: 24 ATVTSYP-YSSPHTPAYDSPSYEHKGP---KYAPHPKPYVYSSPPPPYYTPSPKVNYKSP 79
Query: 499 SPPY 488
PPY
Sbjct: 80 PPPY 83
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 31.1 bits (67), Expect = 0.89
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = -2
Query: 724 SPLCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGL--KPPLSSE 551
SP +KPP + P HTP P ++ P PY P KPP
Sbjct: 35 SPHPVKPPKHPAKPPKPPTVKPPTHTPKPP-----TVKPPPPYIPCPPPPYTPKPPTVKP 89
Query: 550 APSAYLTPSSLGMXKGVSPPY 488
P Y+ P K PPY
Sbjct: 90 PPPPYVKPPPPPTVKPPPPPY 110
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAP-----GLKPPLSSEAPS 542
PP+ + +T S+P P +P S S P +P P L PPL +PS
Sbjct: 28 PPAASSPPPTTTPSSP----PPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPS 83
Query: 541 AYLTPS 524
A +TPS
Sbjct: 84 APITPS 89
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 444 VIPRILRSPPPTHPLIEDVVMATNQAIIHYKVKIADNNLVTHKEL 310
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 291 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 115
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 273 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLV 118
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRI 61
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 721 PLCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 542
P+ PP+P S P TP+ P ++ P TP P PP + P
Sbjct: 180 PVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTP----SVP--SPPDVTPTPP 233
Query: 541 AYLTPSSLGMXKGVSPPYF-QVNDESQAS 458
TP S+ G SPPY +DE +A+
Sbjct: 234 ---TPPSVPTPSG-SPPYVPPPSDEEEAA 258
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS--AYL 533
PP + + S R++ P P++ S+ P P E+ P PP S +PS AY
Sbjct: 472 PPPSSKMSPSFRATPP---PPSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYP 528
Query: 532 TPSSLGMXKGVSPP 491
P L PP
Sbjct: 529 PPPPLSPPPPSPPP 542
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -2
Query: 706 PPSPAXLXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 536
P SP+ TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1680 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA 1739
Query: 535 LTPSS 521
+PS+
Sbjct: 1740 YSPSN 1744
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
P SP+ S + S ++P+ L+ S +P +P +P P S +PS+
Sbjct: 1722 PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY 1781
Query: 529 PSSLGMXKGVSPPY 488
S G SP Y
Sbjct: 1782 SPSSPYSSGASPDY 1795
>At4g20200.1 68417.m02953 terpene synthase/cyclase family protein
5-epi-aristolochene synthase, Nicotiana tabacum,
PATX:G505588
Length = 604
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 136 LGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRS*KVARGIEDVDSGAY 288
L G S+ + K +F LK+RP +V I+GR G ED S Y
Sbjct: 464 LAGIFMSMGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGY 514
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -2
Query: 706 PPSPAXLXTSTRSSNPRFHTPTTPDLTSIS-INPLTPY*KEF--APGLKPPLSSEAPSAY 536
PP P L TST S +P P P L S S +PLT + P PP PS
Sbjct: 528 PPPPPPLFTSTTSFSPS-QPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSRS 586
Query: 535 LTP 527
+ P
Sbjct: 587 IPP 589
>At5g49080.1 68418.m06074 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 609
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -2
Query: 679 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 500
+T +S P + +P TP S +P ++ P KP + + P Y +PS K
Sbjct: 18 ATVTSYP-YSSPQTPQYNFPSHQHKSP---KYTPHSKPYIYNSPPPPYYSPSPKVNYKSP 73
Query: 499 SPPY 488
PPY
Sbjct: 74 PPPY 77
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/79 (27%), Positives = 32/79 (40%)
Frame = -2
Query: 727 VSPLCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 548
V P KPP+P S + P + P TP + + +P+ P P PP+
Sbjct: 102 VQPPTYKPPTPTVKPPSVQ---PPTYKPPTPTVKPPTTSPVKP--PTTPPVQSPPVQ--- 153
Query: 547 PSAYLTPSSLGMXKGVSPP 491
P Y P+S +PP
Sbjct: 154 PPTYKPPTSPVKPPTTTPP 172
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -2
Query: 718 LCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINP-LTPY*KEFAPGLKPP-LSSEAP 545
+C+ PP P S + + +P P + S P +P K + PP + S P
Sbjct: 692 VCVCPPPPPCYSPSPKVV---YKSPPPPYVYSSPPPPHYSPSPKVYYKSPPPPYVYSSPP 748
Query: 544 SAYLTPSSLGMXKGVSPPYF 485
Y +PS K PPY+
Sbjct: 749 PPYYSPSPKVHYKSPPPPYY 768
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -2
Query: 724 SPLCIKPPSPAXLXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 545
SP P S S S P +P++P S +PL+ +P S AP
Sbjct: 39 SPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAP 98
Query: 544 SAYLTPSS 521
+ L+PSS
Sbjct: 99 PSSLSPSS 106
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 549 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 385
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 384 MATNQAIIHY 355
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 549 LHQRISPPRHWA----WXKGFRPLIFK*MMNHKLRALLVVIPRILRSPPP-THPLIEDVV 385
+HQ + P + W G++ + NH LL ++ S PP +P I+D++
Sbjct: 91 MHQTLQDPSYAQQSNHWDNGYQDFV-NLGPNHTTPDLLSLLQLPRSSLPPFANPSIQDII 149
Query: 384 MATNQAIIHY 355
M T+ ++ Y
Sbjct: 150 MTTSSSVAAY 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,317,223
Number of Sequences: 28952
Number of extensions: 359166
Number of successful extensions: 1238
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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