Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_E11
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0550 - 7115728-7116065,7116793-7117843                           29   4.4  
04_01_0539 - 6986728-6986996,6987807-6988284,6988580-6988594,699...    29   4.4  
01_06_0581 - 30386018-30386440                                         29   4.4  
10_08_0938 + 21693629-21694360,21694558-21694613,21694836-21694869     28   7.8  

>04_01_0550 - 7115728-7116065,7116793-7117843
          Length = 462

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 623 DVFPGDAPPGTXLXRPAPCSAVV 555
           D+F GDAP    L + APCS V+
Sbjct: 259 DIFTGDAPCMEWLDKQAPCSVVL 281


>04_01_0539 -
           6986728-6986996,6987807-6988284,6988580-6988594,
           6990029-6990043,6990279-6990875
          Length = 457

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 623 DVFPGDAPPGTXLXRPAPCSAVV 555
           D+F GDAP    L + APCS V+
Sbjct: 277 DIFTGDAPCMEWLDKQAPCSVVL 299


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 270 SGVRSQVLERLEMRLRSGGGGARRQ 344
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>10_08_0938 + 21693629-21694360,21694558-21694613,21694836-21694869
          Length = 273

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 614 PGDAPPGTXLXRPAPCSAVVLXPLXXRGCLAA 519
           P  +PPGT   RPAP S     PL      AA
Sbjct: 30  PSPSPPGTGRVRPAPVSLPPRPPLLWAAASAA 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,423,697
Number of Sequences: 37544
Number of extensions: 208316
Number of successful extensions: 684
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)