Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E07
(786 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 77 5e-14
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 77 5e-14
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 77 5e-14
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 76 1e-13
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 76 2e-13
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 35 0.38
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 35 0.38
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 257 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 316
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 317 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 348
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 241 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 300
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 301 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 357
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 358 AALQAKSDEKAAVAGK 373
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.4 bits (182), Expect = 5e-14
Identities = 37/92 (40%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 242 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAA 358
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 359 AALQAKSDEKAAVAGK 374
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 76.2 bits (179), Expect = 1e-13
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 272 RKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 331
Query: 391 PLTN 380
PL N
Sbjct: 332 PLKN 335
Score = 44.0 bits (99), Expect = 6e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P + T S + S + R+
Sbjct: 256 PGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRA 315
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKA-LADAEK 271
R+ + VL N ++ + ML+LNPYA ++R IL R L+ A A
Sbjct: 316 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILCQARNHKLRVDKAAAAA 372
Query: 270 SGLKLSKRNPAMKAEK 223
+ L+ A A K
Sbjct: 373 AALQAKSDEKAAVAGK 388
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 75.8 bits (178), Expect = 2e-13
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 392
R+ D L+G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K N
Sbjct: 258 RKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKN 317
Query: 391 PLTNXQGDAETQSLRGRAEEESYLRAAQKEEL 296
PL N + + + LR A+ +L
Sbjct: 318 PLKNLRIMLKLNPYAKTMRRNTILRQARNHKL 349
Score = 44.4 bits (100), Expect = 5e-04
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Frame = -1
Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRW-PTLTSHVFSS--LMRS 448
PGGH GRF W +SAF + G R + + P T S + S + R+
Sbjct: 242 PGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRA 301
Query: 447 GRSSVLPTNA*SVLHAN*TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLK 292
R+ + VL N ++ + ML+LNPYA ++R IL R L+
Sbjct: 302 LRAPRKKIHR-RVLKKNPLKN--LRIMLKLNPYAKTMRRNTILRQARNHKLR 350
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 34.7 bits (76), Expect = 0.38
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRK 398
++ DPL P ++K + L + ++AN + RL+KSD+++ +P N V I +
Sbjct: 23 KENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGR 82
Query: 397 LNPLTNXQGDAETQSLRGR---AEEESYLRAAQKEE 299
+ +T DAE++ + R ++ES L+ ++E
Sbjct: 83 IAMVTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 118
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 34.7 bits (76), Expect = 0.38
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = -3
Query: 571 RQXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRK 398
++ DPL P ++K + L + ++AN + RL+KSD+++ +P N V I +
Sbjct: 768 KENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGR 827
Query: 397 LNPLTNXQGDAETQSLRGR---AEEESYLRAAQKEE 299
+ +T DAE++ + R ++ES L+ ++E
Sbjct: 828 IAMVTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 863
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,963,628
Number of Sequences: 237096
Number of extensions: 1563967
Number of successful extensions: 2845
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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