Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_E07
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...    99   3e-21
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...    99   3e-21
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...    99   3e-21
BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p pro...    30   3.1  
AY061099-1|AAL28647.1|  743|Drosophila melanogaster LD08841p pro...    30   3.1  
AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.    30   3.1  
AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA...    30   3.1  
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    30   4.1  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    30   4.1  
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    30   4.1  
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    30   4.1  
AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA ...    29   7.2  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =   99 bits (238), Expect = 3e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -3

Query: 556 LFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 380
           LFG+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTN 324



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -1

Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGR- 442
           PGGH GRFV W +SAF R     G  +     ++    P    P + +   S L++S   
Sbjct: 245 PGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKSEEI 301

Query: 441 SSVLPTNA*SVLHAN*TRSPIX--KAMLRLNPYAAVLKRKAILELRRRKNLKALADAEKS 268
             VL      V  +    +P+   + +++LNPYA VLKR+A L   +R   K LA A+K 
Sbjct: 302 RKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQ 361

Query: 267 GLKLSKRNPAMKAEKLR 217
            ++L+K + A  A K R
Sbjct: 362 NVELAKSHFANVATKAR 378


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =   99 bits (238), Expect = 3e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -3

Query: 556 LFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 380
           LFG+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTN 324



 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
 Frame = -1

Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGR- 442
           PGGH GRFV W +SAF R     G  +     ++    P    P + +   S L++S   
Sbjct: 245 PGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKSEEI 301

Query: 441 SSVLPTNA*SVLHAN*TRSPIX--KAMLRLNPYAAVLKRKAILELRRRKNLKALADAEKS 268
             VL      V  +    +P+   + +++LNPYA VLKR+A L   +R   K LA A+K 
Sbjct: 302 RKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQ 361

Query: 267 GLKLSKRNPAMKAEKLRERR 208
            ++L+K + A  A K    R
Sbjct: 362 NVELAKSHFANVATKAAANR 381


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =   99 bits (238), Expect = 3e-21
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -3

Query: 556 LFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 380
           LFG+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTN 324



 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
 Frame = -1

Query: 618 PGGHFGRFVXWXQSAFGRXTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGR- 442
           PGGH GRFV W +SAF R     G  +     ++    P    P + +   S L++S   
Sbjct: 245 PGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKSEEI 301

Query: 441 SSVLPTNA*SVLHAN*TRSPIX--KAMLRLNPYAAVLKRKAILELRRRKNLKALADAEKS 268
             VL      V  +    +P+   + +++LNPYA VLKR+A L   +R   K LA A+K 
Sbjct: 302 RKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQ 361

Query: 267 GLKLSKRNPAMKAEKLRERR 208
            ++L+K + A  A K    R
Sbjct: 362 NVELAKSHFANVATKAAANR 381


>BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p protein.
          Length = 1514

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 546  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGRSSVLP 427
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>AY061099-1|AAL28647.1|  743|Drosophila melanogaster LD08841p
           protein.
          Length = 743

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 546 HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGRSSVLP 427
           +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 477 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 516


>AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.
          Length = 1514

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 546  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGRSSVLP 427
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA
            protein.
          Length = 1514

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 546  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGRSSVLP 427
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
           protein.
          Length = 1823

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 431
           +G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 597 YGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 431
           +G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 448 YGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 488


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
           isoform B protein.
          Length = 1818

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 431
           +G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 592 YGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 632


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
           isoform A protein.
          Length = 1823

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 553 FGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 431
           +G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 597 YGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


>AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA
           protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -1

Query: 393 TRSPIXKAMLRLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNP 241
           T +P+    L  +P A +  RK     +R  +L++ A++E SG+ +   NP
Sbjct: 505 TTTPVKVEKLLQSPIARLEARKKERRKQRPNSLESSAESEASGMDVDPSNP 555


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,438,646
Number of Sequences: 53049
Number of extensions: 449962
Number of successful extensions: 1439
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)