BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_E06 (857 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 29 5.6 AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 29 5.6 AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 9.8 >AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical protein F48A11.5a protein. Length = 632 Score = 28.7 bits (61), Expect = 5.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -1 Query: 125 TSSSFFHRRRGVRHNPVRPPS 63 +SS+ F RRG R NPV PP+ Sbjct: 162 SSSASFSSRRGTRANPVPPPN 182 >AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical protein F48A11.5b protein. Length = 627 Score = 28.7 bits (61), Expect = 5.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -1 Query: 125 TSSSFFHRRRGVRHNPVRPPS 63 +SS+ F RRG R NPV PP+ Sbjct: 157 SSSASFSSRRGTRANPVPPPN 177 >AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical protein Y48B6A.3 protein. Length = 892 Score = 27.9 bits (59), Expect = 9.8 Identities = 16/43 (37%), Positives = 16/43 (37%) Frame = -2 Query: 412 GSSYGDGASRYGGEYQQPAAQPPGDDYEYTGGSGDGYQRASKR 284 G G G GG Y QP Q GG GYQR R Sbjct: 836 GGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPYR 878 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,469,050 Number of Sequences: 27780 Number of extensions: 137536 Number of successful extensions: 470 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 470 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2139963672 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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