BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_E05 (865 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical pr... 30 1.9 >Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical protein T23D5.3 protein. Length = 237 Score = 30.3 bits (65), Expect = 1.9 Identities = 22/83 (26%), Positives = 33/83 (39%) Frame = +3 Query: 570 PRRNTAPXXSACAXGAXSGKRLPGNIATAXLXTLXXGSXASAPGTGTEXXHIPXPPLTSX 749 P+R + A GA + R PG++ TA T + +P T + PP T+ Sbjct: 92 PQRVEPVMTTTVAPGATT-VRSPGSVTTAGSATTAGSATTGSPSAATTAATVAAPPTTTA 150 Query: 750 QYCXILXVNSXKXHFRSPFWXNP 818 IL + S + PF P Sbjct: 151 A-VSILTLKSAFLYVTKPFQPLP 172 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,382,822 Number of Sequences: 27780 Number of extensions: 147438 Number of successful extensions: 290 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 290 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2160943708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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