Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_E03
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 287 2e-78
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 282 4e-77
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 116 3e-27
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 62 9e-11
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.26
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.59
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.78
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.4
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 27 2.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.5
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 287 bits (703), Expect = 2e-78
Identities = 126/157 (80%), Positives = 141/157 (89%)
Frame = -2
Query: 601 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 422
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQ
Sbjct: 287 HESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQ 346
Query: 421 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 242
FVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 347 FVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 406
Query: 241 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 131
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 407 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 63.7 bits (148), Expect = 3e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -1
Query: 713 GALNGTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAY 603
G+LN EFQTNLVPYPRIHFPLVTY+P++SA KA+
Sbjct: 250 GSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAF 286
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 282 bits (692), Expect = 4e-77
Identities = 125/157 (79%), Positives = 139/157 (88%)
Frame = -2
Query: 601 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 422
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQ
Sbjct: 283 HESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQ 342
Query: 421 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 242
FVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 343 FVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 402
Query: 241 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 131
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 66.1 bits (154), Expect = 6e-12
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -1
Query: 716 DGALNGTSPEFQTNLVPYPRIHFPLVTYAPVISAEKAY 603
+G+LN EFQTNLVPYPRIHFPLVTYAP++SA KA+
Sbjct: 245 EGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAF 282
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 116 bits (280), Expect = 3e-27
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = -2
Query: 598 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 419
+ +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + F
Sbjct: 282 QAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYF 341
Query: 418 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRA 239
V+W P + PP DL + + + N+T+I E + RL +F M+ ++A
Sbjct: 342 VEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKA 393
Query: 238 FVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 134
F+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 713 GALNGTSPEFQTNLVPYPRIHFPLVTYAPV 624
G LN + N+VP+PR+HF +V +AP+
Sbjct: 244 GELNSDLRKLAVNMVPFPRLHFFMVGFAPL 273
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 62.1 bits (144), Expect = 9e-11
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Frame = -2
Query: 691 PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTHEQLSVAEITNACFEPANQMVKCDP-RHGK 515
PS R + LT + + ++ R+ T V ++ P NQMV +P +
Sbjct: 262 PSPRCHFLLTSYTPFTNQQVEEAKAIRKTT-----VLDVMRRLLLPKNQMVSVNPSKKSC 316
Query: 514 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 335
+++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ +
Sbjct: 317 FISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL 376
Query: 334 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAAL 164
ML+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L
Sbjct: 377 -----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADL 431
Query: 163 EKDYE 149
+YE
Sbjct: 432 INEYE 436
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 713 GALNGTSPEFQTNLVPYPRIHFPLVTYAP 627
G +N +L+P PR HF L +Y P
Sbjct: 247 GYMNNDLVSIIASLIPSPRCHFLLTSYTP 275
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.59
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 696 LTRVPD*LGALPPYPLPTGHVRASHLCREGLPM---NSFPSPRSQTHASSPPTR 544
L VP PP P P+ + R +P N+ PSP S + AS+ P R
Sbjct: 1226 LPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAPAR 1279
Score = 28.7 bits (61), Expect = 1.0
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = -3
Query: 687 VPD*LGALPPYPLPTGHVRASHLCREGLPMNSFPSPRSQTHASSPPTRW*NATPVMASTW 508
VP LPP P+PT +P S +P T SS P+ NA+P S+
Sbjct: 1219 VPTPSAGLPPVPVPTAKA-------PPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSS 1271
Query: 507 LAVCCTVVTSYPR 469
+A TS R
Sbjct: 1272 MASAAPARTSVSR 1284
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.78
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -3
Query: 606 LPMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 427
+P S +P + T+ ++ + +TPV ++ CT TS P T + S P
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTT 470
Query: 426 SNSSTGVQPVSRSVSTTSHP 367
+N +T S TS P
Sbjct: 471 TNCTTSTSIPYTSTPVTSTP 490
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -3
Query: 585 SPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGV 406
+P + T+ ++ + +TPV ++ CT TS P T P S ++ S++
Sbjct: 525 TPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTS 583
Query: 405 QPVSRSVSTTS 373
PV+ + TTS
Sbjct: 584 TPVTTTNCTTS 594
Score = 25.8 bits (54), Expect = 7.3
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = -3
Query: 666 LPPYPLPTGHVRASHLCREGLPMNSFP---SPRSQTHASSPPTRW*NATPVMASTWLAVC 496
+PP T + +P S P +P + T+ ++ + +TPV ++
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTN 472
Query: 495 CTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 373
CT TS P T + S P +N +T S TS
Sbjct: 473 CTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 577 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 452
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 449 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 592
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 285 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 112
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 111 EPKSTK 94
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 685 SRLTWCLTPVSTSHWSRTRQSSLPRRPTHEQLSVA 581
SR T CLTPV H+ + + + P H L +A
Sbjct: 216 SRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIA 250
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 453 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 367
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 472 WVRRHHGTAYSKPCTCHDGG 531
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 7.3
Identities = 25/101 (24%), Positives = 40/101 (39%)
Frame = -3
Query: 666 LPPYPLPTGHVRASHLCREGLPMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 487
LPP P +RA P + P+ +Q ++ ++ + P A+
Sbjct: 59 LPPPPKHASQLRAGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPSQPPKEPALPSRG 118
Query: 486 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 364
S P +RP S+PSVL+ PV +V + PP
Sbjct: 119 TPSLP---SRPG--SRPSVLNQEQVPPPPVRPNVMSQMPPP 154
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 456 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 361
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,127,415
Number of Sequences: 5004
Number of extensions: 67917
Number of successful extensions: 247
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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