Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_D24
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 302 2e-82
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 68 8e-12
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536... 52 7e-07
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 42 6e-04
12_02_0453 + 19192060-19192301,19192477-19192559,19193246-191933... 41 0.001
03_01_0535 + 4006284-4006418,4006483-4006599,4007363-4007587,400... 39 0.004
02_01_0487 + 3503003-3503037,3505802-3505833,3506012-3506127,350... 30 1.9
04_01_0376 - 4929447-4929731 29 5.7
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757 29 5.7
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 28 7.5
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 28 7.5
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 28 7.5
11_04_0354 + 16697571-16700256,16700335-16700759 28 9.9
05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033 28 9.9
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 28 9.9
>07_03_0405 -
17767303-17767665,17767815-17768039,17768115-17768342,
17768607-17768621,17768622-17768810,17769106-17769213,
17769917-17770045
Length = 418
Score = 302 bits (741), Expect = 2e-82
Identities = 142/210 (67%), Positives = 163/210 (77%)
Frame = -3
Query: 759 DILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF 580
+I+WNTAVVI + GN+IG HRKNHIPRVGDFNES YYMEGNTGHPVF T YGKI VNIC+
Sbjct: 202 EIVWNTAVVIGNHGNIIGIHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGVNICY 261
Query: 579 GRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYE 400
GRHH LNW+ FG NGAEIVFNPSAT+ GE SE MW +EARNAAI N YF +INRVG E
Sbjct: 262 GRHHPLNWLAFGLNGAEIVFNPSATV-GE-LSEPMWPIEARNAAIANSYFVGSINRVGTE 319
Query: 399 EFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRD 220
FPN FTS DGKP H D G FYGSS+F PD P LSR RDGL+I+ +DLNL RQI+D
Sbjct: 320 VFPNPFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSRYRDGLMISDMDLNLCRQIKD 379
Query: 219 RRCYYMTQRLDMYVNSLSKVLELDYKPQVV 130
+ + MT R D Y + LS+ L+ D+KPQV+
Sbjct: 380 KWGFRMTARYDTYASLLSEYLKPDFKPQVI 409
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 68.1 bits (159), Expect = 8e-12
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Frame = -3
Query: 750 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRH 571
+N+ +I G +G +RK+HIP + E Y+ G+TG F T+Y I V IC+ +
Sbjct: 105 YNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQW 164
Query: 570 HVLNWMMFGQNGAEIVFNPSATIAGEG-----GSEYMWNVEARNAAITNCYFTAAINRVG 406
GAEI+F P+A I E S W + A N A NR+G
Sbjct: 165 FPECARAMVLQGAEILFYPTA-IGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIG 223
Query: 405 YEEFPNEFTSADGKPAHKDLGL-FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQ 229
E E H + + F+G+S+ GP G + + +L+A DL+ +
Sbjct: 224 RETVETE---------HGESTITFFGNSFIAGPTGEIVKLANDKDEDVLVAEFDLDEIKS 274
Query: 228 IRDRRCYYMTQRLDMY 181
R + +R D+Y
Sbjct: 275 TRHGWGIFRDRRPDLY 290
>06_01_0729 +
5367796-5368071,5368390-5368483,5368708-5368782,
5368919-5368997,5369155-5369170,5369260-5369346,
5369451-5369533,5369616-5369769
Length = 287
Score = 51.6 bits (118), Expect = 7e-07
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Frame = -3
Query: 753 LWNTAVVISDTGNVIGKHRKNHIPRV---GD--FNESNYYMEGNTGHPVFATRYGKIAVN 589
L+NT VI G + KHRK H+ + GD F ES+ + G + T G+I +
Sbjct: 73 LFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDITFRESDTFTAGQE-PTIVDTDVGRIGIG 131
Query: 588 ICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRV 409
IC M++ GA ++ PSA G + +W++ ++ A+ N F +
Sbjct: 132 ICHDIRFPELAMLYRSRGAHLICYPSAFNMSTG--QLLWDLMQKSRAVDNQLFVVTCSPA 189
Query: 408 GYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQ 229
PN A D + +G S GP G + + ++ +D ++ +
Sbjct: 190 ---RDPN---------AESDY-MIWGHSSLIGPFG-EVIATAGHEEATVVGEIDHSMIQT 235
Query: 228 IRDRRCYYMTQRLDMY 181
IRD M +R D+Y
Sbjct: 236 IRDNLPLEMQRREDLY 251
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 41.9 bits (94), Expect = 6e-04
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Frame = -3
Query: 753 LWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF-G 577
L+NT + G +GKHRK + G + +G+T PV+ T GKI IC+
Sbjct: 139 LYNTVLFFDPLGKYLGKHRK--VMPTGLERVFWGFGDGST-IPVYDTPIGKIGAVICWEN 195
Query: 576 RHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAIN----RV 409
R +L M+ + G +I P+A + W + A+ F + N R
Sbjct: 196 RMPLLRTAMYAK-GVQIYCAPTADFSPS------WQASMTHIAVEGGCFVLSANQFCRRK 248
Query: 408 GYEEFPN-EFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIA 256
Y P F D +P+ + + ++ G S P G G + +GLL A
Sbjct: 249 NYPPAPEYTFGGLDEEPSPESV-IWPGGSSIVSPSGTVLAGPNYEGEGLLTA 299
>12_02_0453 +
19192060-19192301,19192477-19192559,19193246-19193328,
19193616-19193668,19194041-19194169,19194585-19194643,
19195317-19195429,19195571-19195663,19195810-19195912,
19196233-19196315,19196407-19196448
Length = 360
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Frame = -3
Query: 750 WNTAVVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNI 586
+NT V+I D+G + +RK H +P + ES + G+T V + +G++ + +
Sbjct: 176 YNTHVLIDDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAV-DSPFGRLGLTV 234
Query: 585 CFG-RHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAA 421
C+ R L + ++ A+++ PSA G E W + R AI T CY AA
Sbjct: 235 CYDLRFPELYQCLRFKHQAQVLLVPSAFTKVTG--EAHWEILLRARAIETQCYVIAA 289
>03_01_0535 +
4006284-4006418,4006483-4006599,4007363-4007587,
4008112-4008205,4008587-4008661,4009045-4009123,
4009385-4009400,4009441-4009584,4009822-4009904,
4010012-4010093
Length = 349
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = -3
Query: 753 LWNTAVVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRYGKIAVN 589
L+NT V G + GKHRK H IP F ES G V T G+I +
Sbjct: 140 LYNTCCVFGSDGELKGKHRKIHLFDIDIPGKITFKESKTLTAGQ-DLTVVDTDVGRIGIG 198
Query: 588 ICFGRHHVLNWMMFGQNGAEIVFNPSA 508
IC+ M++ GA ++ P A
Sbjct: 199 ICYDIRFQELAMLYAARGAHLLCYPGA 225
>02_01_0487 +
3503003-3503037,3505802-3505833,3506012-3506127,
3506227-3506437,3506555-3506792,3507075-3507252,
3507962-3508079,3508167-3508373,3509134-3509234
Length = 411
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 522 FNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLG 343
F+PS I GEGG ++ + RN + + +R G +EF NE A +H++L
Sbjct: 45 FSPSNKI-GEGGFGSVYKGKLRNGKLVAVKVLSLESRQGAKEFLNEL-MAISNVSHENLV 102
Query: 342 LFYG 331
YG
Sbjct: 103 KLYG 106
>04_01_0376 - 4929447-4929731
Length = 94
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 597 RSCRIWSRIQDGRCYLPCSSW 659
RSC W +Q GRC CS+W
Sbjct: 63 RSCAAW--LQQGRCSAGCSAW 81
>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
Length = 397
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 743 LRLSLVTPET*SGSIARTTFRESAILTNPTTTWKVTPAILYSRP 612
+ +SL TP S S SA + PTTT +PA YSRP
Sbjct: 132 VEMSLATPPPPSSSATSAASNTSAGVA-PTTTTTSSPAPSYSRP 174
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 694 LAMLPDHVSGVTNDNRSVPKYVRXASRS 777
+AM HV+ ++ND R +PK VR A R+
Sbjct: 618 VAMETSHVALMSNDIRRIPKAVRLARRT 645
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 265 QAVSGAGQTGAPNAVGAAEVARSVEQAQVFVCRFPVSRSELVRELLVADSVDGRCEVAV 441
+ SG P+A+ A E + E ++ V R P LVR + + +S + E AV
Sbjct: 342 KCASGGCAGAVPSALAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAV 400
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 544 SEHHPVQDVVPSE-ADVHRDLAVSGREYRMAGVTFHVVV 657
+E HP+ DV+PSE +V D + R MAG H +V
Sbjct: 282 AEVHPIDDVMPSEVVEVKVDDEETNRTDEMAGDGDHAMV 320
>11_04_0354 + 16697571-16700256,16700335-16700759
Length = 1036
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 196 LGHVITTSVSDLSVQVQVHGRD*QAVSGAGQTGAPNAVG 312
LG V+ TSVS+LS Q+Q+ +SG G N VG
Sbjct: 331 LGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVG 369
>05_03_0526 + 15021174-15021363,15021743-15021843,15021893-15022033
Length = 143
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 256 GRGLEPEQTDQRQTLLLHDPTPGHVREQSQQSTRAGLQ 143
G+G EP+ D ++ L ++D PG E Q S+ AGL+
Sbjct: 89 GKGHEPDWRDLQELLRIYD--PGTSTECKQASSGAGLR 124
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +1
Query: 280 AGQTGAPNAVGAAEVA-----RSVEQAQVFVCRFPVSRSELVRELL------VADSVDGR 426
A + PNA+ AAE+ S+ Q ++ + E + E L +A+ R
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIANKYLSR 184
Query: 427 CEVAVRDSCVPSF--NVPHVLAAAFSGDRR 510
+++ C P + +PH +A AFSG+RR
Sbjct: 185 SHLSI--DCRPDWMTRIPHYIAVAFSGERR 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,149,928
Number of Sequences: 37544
Number of extensions: 455551
Number of successful extensions: 1379
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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