Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_D14
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    25   0.77 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 205 DGTEAGR--RVRQAARPRLQHGPPRLEPPRSNYSFAGA 312
           D   +GR  R R+  +P  + G P  E  R   +F+GA
Sbjct: 201 DRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTAFSGA 238


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 152 RHPRSRPTQSARTGRTASTVRRP 220
           RH +SR  +  +TGR   T R P
Sbjct: 209 RHNQSRSKRQPKTGREDQTRRNP 231


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 256 QHGPPRLEPPRSNYSFAGAPFPPRTKVASP 345
           Q GPP  +PP       G   P  T  A P
Sbjct: 200 QQGPPHQQPPIQQQPNQGQQPPGNTAAALP 229


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +1

Query: 256 QHGPPRLEPPRSNYSFAGAPFPPRTKVASP 345
           Q GPP  +PP       G   P  T  A P
Sbjct: 202 QQGPPHQQPPIQQQPNQGQQPPGNTAAALP 231


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 508 VAPYGEPRIVPSTAPPP 558
           V P  E   VPST PPP
Sbjct: 200 VVPPTEDCDVPSTIPPP 216


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 42  DEEDTAEHAKKKKK 1
           ++EDT +  KKKKK
Sbjct: 254 EDEDTKKEDKKKKK 267


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 308 PAKE*FERGGSNLGGPCW 255
           P  E F  GG  +  PCW
Sbjct: 369 PKGEIFHMGGDEVYIPCW 386


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 387 PWDLEAEALA 358
           PWD  AEALA
Sbjct: 332 PWDKNAEALA 341


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 513  CHXLTXKNVAAXRRPQRAIAVRAIRGYRTVSFE 415
            CH +  +     + P R +   A +G + VSF+
Sbjct: 1683 CHNIKTQGWTVVQDPNRRMGPYAYKGDQWVSFD 1715


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,573
Number of Sequences: 336
Number of extensions: 3101
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)