Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_D11
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.6  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 696 LNELCLYRPPTVHAYRPFASMGRSCYDIL 782
           LNEL     PT   Y P  +M  SC +IL
Sbjct: 368 LNELDRREDPTNDEYLPGCAMVDSCSNIL 396


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 837 LHPIDVNGVVWHQ 799
           +HPI   G+VW+Q
Sbjct: 191 IHPIGSGGMVWYQ 203


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 837 LHPIDVNGVVWHQ 799
           +HPI   G+VW+Q
Sbjct: 505 IHPIGSGGMVWYQ 517


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 837 LHPIDVNGVVWHQ 799
           +HPI   G+VW+Q
Sbjct: 738 IHPIGSGGMVWYQ 750


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 837 LHPIDVNGVVWHQ 799
           +HPI   G+VW+Q
Sbjct: 738 IHPIGSGGMVWYQ 750


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 414 KHNMSTNLSVIKNPRQHN 467
           +HN+S N   +K PR ++
Sbjct: 132 RHNLSLNKCFVKVPRHYD 149


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 141 GHSRSEMSASRRRLSAPNAYDSPP 212
           GH+ + + AS+  L +P++  +PP
Sbjct: 258 GHAFTLVDASQHDLGSPSSGPAPP 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,831
Number of Sequences: 336
Number of extensions: 4442
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)