Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_D08
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   9.0  
DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homo...    28   9.0  
AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditi...    28   9.0  
AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditi...    28   9.0  
AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.       28   9.0  

>Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical
           protein F37H8.5 protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +2

Query: 542 G*TIQRLANFCFAMIGRADIEGSKSNVAMNAWLPQASY-PWWYFSGTS 682
           G  IQRL   C      AD++   +    N W  Q  + PW   +G S
Sbjct: 185 GGDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVS 232


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 428 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 249
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 248 SH--SKRETRRRSP 213
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


>DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homolog
           protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 57  RRRSTEHN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRL 233
           + ++  HN +P G EV      +   N VI+GPSE  CTC +  +   S +SK  + +  
Sbjct: 162 QNQNQNHNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNC 217

Query: 234 AF 239
           A+
Sbjct: 218 AY 219


>AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform a protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 57  RRRSTEHN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRL 233
           + ++  HN +P G EV      +   N VI+GPSE  CTC +  +   S +SK  + +  
Sbjct: 162 QNQNQNHNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNC 217

Query: 234 AF 239
           A+
Sbjct: 218 AY 219


>AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform b protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 57  RRRSTEHN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRL 233
           + ++  HN +P G EV      +   N VI+GPSE  CTC +  +   S +SK  + +  
Sbjct: 162 QNQNQNHNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNC 217

Query: 234 AF 239
           A+
Sbjct: 218 AY 219


>AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 57  RRRSTEHN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRL 233
           + ++  HN +P G EV      +   N VI+GPSE  CTC +  +   S +SK  + +  
Sbjct: 162 QNQNQNHNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNC 217

Query: 234 AF 239
           A+
Sbjct: 218 AY 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,797,994
Number of Sequences: 27780
Number of extensions: 365225
Number of successful extensions: 1057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)