Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_D05
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   3.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   4.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.8  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 706 LICWVPGCCV 735
           LICWVP  CV
Sbjct: 282 LICWVPFFCV 291


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 222 PRSSTAAGRQQRVGFASHLDHEALELGYGV 311
           PRS+  A R+      S++ HE L   + V
Sbjct: 326 PRSAVLAAREITSSSCSYMAHEKLSYAFSV 355


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 14/54 (25%), Positives = 21/54 (38%)
 Frame = -3

Query: 327 QSAHDQHHSRAQGLRDRGGSQIRLVAGGQRRYCCGGRHQPSVPDRVEGLYHQHQ 166
           Q    QH S+AQ    +   Q  +    Q+      + QP +  R +    QHQ
Sbjct: 180 QPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQ 233



 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 198 DRVEGLYHQHQADCRRRLAEANGPGAGSPAP 106
           D     Y+QHQ D    +    G  + SP+P
Sbjct: 87  DMRNATYYQHQQDHGSGMDGMGGYRSASPSP 117


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 213 QPSVPDRVEGLYHQHQADCRRRLA 142
           +PS   +  G+   HQ  C  R+A
Sbjct: 276 EPSSTSKKSGIVRSHQQSCINRVA 299


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 362 IGRHDWDALVANNQLMINTI 303
           +G HDW +    N  ++++I
Sbjct: 217 VGEHDWSSKTETNATVLHSI 236


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/12 (58%), Positives = 12/12 (100%)
 Frame = -1

Query: 512 VLRDLNKKVDEV 477
           VL+D+N++VDE+
Sbjct: 292 VLKDINRQVDEL 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,642
Number of Sequences: 438
Number of extensions: 3018
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)