Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C16
(792 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 110 2e-24
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 97 3e-20
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 97 3e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 96 4e-20
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 96 4e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 93 5e-19
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 86 6e-17
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 86 6e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 81 2e-15
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 69 1e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 69 1e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 69 1e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 68 1e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 62 8e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 3e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 3e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 58 1e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 1e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 33 0.59
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.4
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.4
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 31 1.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 31 1.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 31 1.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 31 1.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 31 1.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 31 1.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 31 1.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 31 1.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 31 1.8
U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein. 30 3.2
AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein. 29 5.5
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ... 29 5.5
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA... 29 5.5
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 7.3
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 7.3
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 9.6
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 29 9.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 110 bits (264), Expect = 2e-24
Identities = 59/160 (36%), Positives = 85/160 (53%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
KYLGV LD R TF H+ +R R + Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 746 KYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKY 805
Query: 609 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+
Sbjct: 806 GCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYH 865
Query: 429 DKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPP 310
D+ RH N L A P R+ +RR+P+ +I+ P
Sbjct: 866 DRLERHRNRLASALNR--SRPPRRL--NRRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/131 (35%), Positives = 74/131 (56%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 613
V YLGV LD R T+R HI+ L+ +I RS +SL K LY + ++P+ T
Sbjct: 736 VTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWT 795
Query: 612 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
Y S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++
Sbjct: 796 YGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKY 855
Query: 432 FDKAARHENPL 400
+K H NPL
Sbjct: 856 NEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 96.7 bits (230), Expect = 3e-20
Identities = 47/131 (35%), Positives = 74/131 (56%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 613
V YLGV LD R T+R HI+ L+ +I RS +SL K LY + ++P+ T
Sbjct: 736 VTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWT 795
Query: 612 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
Y S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++
Sbjct: 796 YGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKY 855
Query: 432 FDKAARHENPL 400
+K H NPL
Sbjct: 856 NEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 96.3 bits (229), Expect = 4e-20
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
KYLG+TLD + TF HI ++ R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 609 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 429 DKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 307
++ H N L G AD R RR +H D P+
Sbjct: 871 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 96.3 bits (229), Expect = 4e-20
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
KYLG+TLD + TF HI ++ R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 609 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 429 DKAARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 307
++ H N L G AD R RR +H D P+
Sbjct: 673 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 92.7 bits (220), Expect = 5e-19
Identities = 44/130 (33%), Positives = 72/130 (55%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
KYLG+TLD R TF PH+K R +L ++ R+S M+LR K +Y C+ P+ Y
Sbjct: 752 KYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLY 811
Query: 609 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
++ AA+ + Q++Q+R R P++VR LH DL+L ++ + + + R+
Sbjct: 812 GIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYS 871
Query: 429 DKAARHENPL 400
D+ RH + L
Sbjct: 872 DRLRRHHSIL 881
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 85.8 bits (203), Expect = 6e-17
Identities = 35/114 (30%), Positives = 65/114 (57%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 613
++YLG+ D + TF+ HI + I LYP+I R+SK+S+ NK+ ++KT P++
Sbjct: 770 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 829
Query: 612 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 451
Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 830 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 85.8 bits (203), Expect = 6e-17
Identities = 35/114 (30%), Positives = 65/114 (57%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 613
++YLG+ D + TF+ HI + I LYP+I R+SK+S+ NK+ ++KT P++
Sbjct: 718 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 777
Query: 612 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 451
Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 778 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/110 (35%), Positives = 66/110 (60%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 613
V YLGV LD R T+R HI+ + + L+ +I S +SL +KV LY + ++P+ T
Sbjct: 738 VTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWT 797
Query: 612 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 463
Y S ++ +A+ ++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 798 YGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 68.5 bits (160), Expect = 1e-11
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
+YLG+ LD R TF H+ ++ + +L +I + S + K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 609 ASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
A ++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRY 928
Query: 432 FDKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ HENPLI + Y P +R+E S+ R
Sbjct: 929 ANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 68.5 bits (160), Expect = 1e-11
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
+YLG+ LD R TF H+ ++ + +L +I + S + K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 609 ASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
A ++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRY 928
Query: 432 FDKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ HENPLI + Y P +R+E S+ R
Sbjct: 929 ANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 68.5 bits (160), Expect = 1e-11
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
+YLG+ LD R TF H+ ++ + +L +I + S + K+ L+K + P+ Y
Sbjct: 809 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 868
Query: 609 ASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
A ++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 869 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRY 928
Query: 432 FDKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ HENPLI + Y P +R+E S+ R
Sbjct: 929 ANSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 68.1 bits (159), Expect = 1e-11
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
+YLG+ LD R TF H+ ++ + +L +I + S + K+ L+K + P+ Y
Sbjct: 362 RYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHY 421
Query: 609 ASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRH 433
A ++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 422 AIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRY 481
Query: 432 FDKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ HENPLI + Y P +R+E S+ R
Sbjct: 482 ANSLTDHENPLIYDLLINAYKP---NRLELSKNR 512
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.1 bits (144), Expect = 8e-10
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGVTLDS+ T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 811 YLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + RN + D ++++ ++ Q A R
Sbjct: 871 IAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFS 930
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 931 ETIKSHPNIAVRRILSRHYIP---NRLERSRQR 960
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 683 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 743 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 802
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 803 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 832
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 761 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 821 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 880
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 881 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 910
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 58.4 bits (135), Expect = 1e-08
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 14 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 73
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R
Sbjct: 74 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFS 133
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + +YIP +R+E SR+R
Sbjct: 134 ETIKSHPNIAVRRIFTRHYIP---NRLERSRQR 163
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 58.4 bits (135), Expect = 1e-08
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = -1
Query: 786 YLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 607
YLGV LDS+ T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
Query: 606 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 430
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFS 918
Query: 429 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 337
+ H N + + +YIP +R+E SR+R
Sbjct: 919 ETIKSHPNIAVRRIFTRHYIP---NRLERSRQR 948
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 32.7 bits (71), Expect = 0.59
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = -1
Query: 789 KYLGVTLDSRXTFRPHIKTVRXRAAFIXGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 610
+YLG+T+ F HI ++R R + G L ++ S R + T+Y + P + +
Sbjct: 735 RYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLF 794
Query: 609 ASVVFAHAA 583
+ V+ A
Sbjct: 795 GAPVWYDTA 803
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 619 DGAYASFVECHLISKG-HFTSPTYHRVET 702
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 619 DGAYASFVECHLISKG-HFTSPTYHRVET 702
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
DLE ISKYL SA + + + +++A G +P + + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 303 L 301
+
Sbjct: 105 M 105
>U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.
Length = 2222
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 262 SSNPSLATKG-STSKLTLRHSPLSFSPDLLSGSRFRXRW*ILRSTTLARVRVSNI 101
SS PS ATK T + +H P + + +S + R RW L+ T ++ NI
Sbjct: 1148 SSKPSEATKDFQTIQARPKHPPFNVTERAMSAQQLRVRWIPLQQTEWMEIQGYNI 1202
>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
Length = 1678
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 168 DPLRRSGE---KLSGLCLRVNLLVEPFV-ASDGFDENGDRCLKYLKAPLVDQ 311
D +R GE ++ LC+ LL + + +DG DE+ D CL+ AP D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449
>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
protein LRP6 protein.
Length = 1678
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 168 DPLRRSGE---KLSGLCLRVNLLVEPFV-ASDGFDENGDRCLKYLKAPLVDQ 311
D +R GE ++ LC+ LL + + +DG DE+ D CL+ AP D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449
>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
protein.
Length = 1678
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 168 DPLRRSGE---KLSGLCLRVNLLVEPFV-ASDGFDENGDRCLKYLKAPLVDQ 311
D +R GE ++ LC+ LL + + +DG DE+ D CL+ AP D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 325 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 173
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 325 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 173
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 792 VKYLGVTLDSRXTFRPHIKTVRXRAAFIXGRL 697
+KYLGV +D R +F+ H + +AA L
Sbjct: 717 LKYLGVLIDRRLSFKAHARYASKKAAMTAAAL 748
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +1
Query: 505 PDEP--RGSDGYPAKTGLNNLKG 567
P EP +G GYP + G+N LKG
Sbjct: 1096 PGEPGAKGLGGYPGRNGINGLKG 1118
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,117,075
Number of Sequences: 53049
Number of extensions: 663072
Number of successful extensions: 1708
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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