Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C14
(806 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 150 5e-35
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 42 0.014
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 42 0.024
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 38 0.39
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 37 0.69
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 35 2.1
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R... 34 3.7
UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2; ... 34 3.7
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 4.8
UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass etched... 34 4.8
UniRef50_A6R1B1 Cluster: Predicted protein; n=1; Ajellomyces cap... 34 4.8
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo... 33 8.5
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 150 bits (363), Expect = 5e-35
Identities = 72/83 (86%), Positives = 72/83 (86%)
Frame = -1
Query: 758 TPXSFCXXXGGXALMHQATLPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRA 579
TP S GG ALMHQATLP D GYIN IIKSPIPYTNHPRLNIHFHQS DAVLEGVRA
Sbjct: 155 TPSSARITMGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRA 214
Query: 578 GVKASVVIRGSISVSHPLVTGHG 510
GVKASVVIRGSISVSHPLVTGHG
Sbjct: 215 GVKASVVIRGSISVSHPLVTGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 42.3 bits (95), Expect = 0.014
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -1
Query: 701 LPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSISVSHPL 525
LP + +N IK + YT+ PRL F+++ V G A + S++IRG I S P+
Sbjct: 165 LPAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPI 223
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 41.5 bits (93), Expect = 0.024
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 701 LPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGV-KASVVIRGSISVS 534
LP D N ++K + Y N P+L + FH++ DA V V S+VIRG + S
Sbjct: 169 LPADLRSTNPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 731 GGXALMHQAT-LPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVI 555
GG LM T LP D +N ++K P+ YT+ PR + + + G + ++++
Sbjct: 2120 GGPVLMSSTTHLPADLTRLNPVLKGPVKYTDCPRFSYSVYSN-----GGTKGTNLCTIIL 2174
Query: 554 RGSISVSHP 528
RG + +S P
Sbjct: 2175 RGVVRLSGP 2183
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 36.7 bits (81), Expect = 0.69
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 731 GGXALMHQATLPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIR 552
GG L H L D Y+N +IK + Y + P+L ++ + D G A A+V++
Sbjct: 1906 GGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKLTLN---ASDPTGSGSTATTVATVLVS 1962
Query: 551 GSI 543
G +
Sbjct: 1963 GKL 1965
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = -3
Query: 720 PYASSHPPLXXRVHQPDHQIPDSIHQPPQT*HPFPSIP 607
P+ SSHPP HQP HQ P HQPP H P P
Sbjct: 428 PHPSSHPP-----HQPPHQSP---HQPPHAPHQPPHQP 457
>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
OmpA/MotB precursor - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 673
Score = 34.3 bits (75), Expect = 3.7
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -2
Query: 661 PRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 491
P TP PD+T S P TP +P PP + AP+A P+ K +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300
>UniRef50_A6RXJ9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 940
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 729 RXRPYASSHPPLXXRVHQPDHQIPDSIHQ 643
R P A+SHPP + H P HQ P HQ
Sbjct: 206 RQHPSATSHPPPTPQHHLPQHQTPSHSHQ 234
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 261 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 148
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass
etched-line virus|Rep: Coat protein - Bermuda grass
etched-line virus
Length = 195
Score = 33.9 bits (74), Expect = 4.8
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -1
Query: 731 GGXALMHQAT-LPXDXGYINXIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGVK-ASVV 558
GG ++ T +P D +N +IKS + Y + PR ++ P ++ G A K A++
Sbjct: 125 GGPVMLSSTTVIPADLSRMNPVIKSSVSYNDCPRWSL---TCP--LVSGSSANTKLATLY 179
Query: 557 IRGSISVSHP 528
IRG++ +S P
Sbjct: 180 IRGTVRLSSP 189
>UniRef50_A6R1B1 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 308
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +3
Query: 540 ADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWNRGFDDXVDVPXIXGEGG 707
ADGA G PGA G G EM ++ G+ N G + P G GG
Sbjct: 170 ADGAGSVEDGIEPGAKRLKRGGEGATEMAIRRSRPGIGNGGVAEVEGEPGEVGGGG 225
>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
elongatus|Rep: Tll0286 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 158
Score = 33.1 bits (72), Expect = 8.5
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -3
Query: 462 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 283
L LL+VIP L P +H +I + A NQ ++ + + DN T + + +
Sbjct: 8 LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67
Query: 282 TRVYVFDPSCYFSTP 238
R+ F +F P
Sbjct: 68 LRLVGFPEQYHFRHP 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,104,740
Number of Sequences: 1657284
Number of extensions: 14686204
Number of successful extensions: 43246
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 40409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43030
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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