Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C11
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    28   0.43 
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           26   1.7  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   4.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   7.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   7.1  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   7.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 531 RTSLYKKAGWYRSGIP--RALCDIHCAGADSLSLISW 427
           R+ L+K  GWY  G+    ALC + C G  S  ++ W
Sbjct: 385 RSGLFKGGGWYMLGVQSLSALC-LACWGVCSTFVLLW 420


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 655 TAWMASPGDLTVH*--TSSAYIDLPPYTPTAHLRQW 756
           T W  S    T H   T++ + DLPP  PT     W
Sbjct: 187 TVWTDSTATTTTHAPTTTTTWSDLPPPPPTTTTTVW 222


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = +1

Query: 631 PVSSMEVKTAWMASPGDLTVH*--TSSAYIDLPPYTPTAHLRQW 756
           P  +    T W       T H   T++ + DLPP  PT     W
Sbjct: 179 PPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVW 222


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 245 LVPEVPVKRRLLNPQPFRQFACRQTVYADLVQQV 346
           L  E+P ++RLL+ QP  ++ C    Y +L  QV
Sbjct: 506 LAGELPGQQRLLSRQPAPEYWC-SVAYFELDTQV 538


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 56  TLERPRPAARAHGAIVLAVGEQRLPE 133
           T   P+P  R +G IVL +    LPE
Sbjct: 31  TAAAPQPVQRPYGKIVLTLENCLLPE 56


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 56  TLERPRPAARAHGAIVLAVGEQRLPE 133
           T   P+P  R +G IVL +    LPE
Sbjct: 31  TAAAPQPVQRPYGKIVLTLENCLLPE 56


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +1

Query: 655 TAWMASPGDLTVH*--TSSAYIDLPPYTPTAHLRQW 756
           T W       T H   T++ + DLPP  PT     W
Sbjct: 187 TVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVW 222


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 733 ACTVGGLYKQSSFSEPSDRLETPSTLF 653
           A TV GL++ S ++  SD  E P + F
Sbjct: 584 ADTVTGLHETSGYTCISDETEAPGSCF 610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 934,726
Number of Sequences: 2352
Number of extensions: 20303
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)