Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C09
         (908 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-P...    29   6.7  
X57484-1|CAA40722.1|  264|Drosophila melanogaster tra-2 protein.       29   8.8  
M76381-1|AAA69686.1|  136|Drosophila melanogaster transformer-2 ...    29   8.8  
M30939-2|AAA28957.1|  136|Drosophila melanogaster transformer-2 ...    29   8.8  
M30939-1|AAA28954.1|  264|Drosophila melanogaster transformer-2 ...    29   8.8  
M23633-1|AAA28953.1|  264|Drosophila melanogaster protein ( D.me...    29   8.8  
J03155-1|AAA62771.1|  256|Drosophila melanogaster transformer-2 ...    29   8.8  
AY058768-1|AAL13997.1|  264|Drosophila melanogaster SD04329p pro...    29   8.8  
AE013599-1918|AAM68560.1|  136|Drosophila melanogaster CG10128-P...    29   8.8  
AE013599-1914|AAS64911.1|  264|Drosophila melanogaster CG10128-P...    29   8.8  
AE013599-1913|AAS64910.1|  264|Drosophila melanogaster CG10128-P...    29   8.8  
AE013599-1912|AAF58232.2|  264|Drosophila melanogaster CG10128-P...    29   8.8  

>AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-PA,
           isoform A protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 148 HSRSEMSASRRRLSAPNAYDSPP 216
           HSRS  S  RRR  +P+ Y+ PP
Sbjct: 111 HSRSRSSERRRRQRSPHRYNPPP 133


>X57484-1|CAA40722.1|  264|Drosophila melanogaster tra-2 protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>M76381-1|AAA69686.1|  136|Drosophila melanogaster transformer-2
           protein D protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>M30939-2|AAA28957.1|  136|Drosophila melanogaster transformer-2
           protein D protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>M30939-1|AAA28954.1|  264|Drosophila melanogaster transformer-2
           protein A protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>M23633-1|AAA28953.1|  264|Drosophila melanogaster protein (
           D.melanogaster transformer-2 (tra-2) protein mRNA,
           complete cds. ).
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>J03155-1|AAA62771.1|  256|Drosophila melanogaster transformer-2
           protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 6   SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 61


>AY058768-1|AAL13997.1|  264|Drosophila melanogaster SD04329p
           protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>AE013599-1918|AAM68560.1|  136|Drosophila melanogaster CG10128-PB,
           isoform B protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>AE013599-1914|AAS64911.1|  264|Drosophila melanogaster CG10128-PG,
           isoform G protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>AE013599-1913|AAS64910.1|  264|Drosophila melanogaster CG10128-PF,
           isoform F protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


>AE013599-1912|AAF58232.2|  264|Drosophila melanogaster CG10128-PA,
           isoform A protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 52  SXGYSRAAATCSSSTWCHCAGGR-RAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 216
           S  Y    +  SSS     +G + R +    CG  R + S+SRRR  + ++ +SPP
Sbjct: 14  SARYKHKRSASSSSAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPP 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,108,614
Number of Sequences: 53049
Number of extensions: 947869
Number of successful extensions: 2415
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)