Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C08
(871 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein. 36 0.25
CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein. 36 0.25
BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complement... 36 0.25
AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complement... 36 0.25
AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protei... 36 0.25
AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross comp... 36 0.25
DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1, ... 32 3.1
BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1, ... 32 3.1
AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protei... 32 3.1
AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens ... 32 3.1
AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis ... 32 3.1
BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1, ... 31 7.2
BC111373-1|AAI11374.1| 395|Homo sapiens HMG2L1 protein protein. 30 9.5
BC062413-1|AAH62413.1| 394|Homo sapiens HMG2L1 protein protein. 30 9.5
AE006465-4|AAK61258.1| 402|Homo sapiens unknown protein. 30 9.5
>M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 303 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 361
Query: 505 CAF 497
CAF
Sbjct: 362 CAF 364
>CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 303 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 361
Query: 505 CAF 497
CAF
Sbjct: 362 CAF 364
>BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 303 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 361
Query: 505 CAF 497
CAF
Sbjct: 362 CAF 364
>AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 303 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 361
Query: 505 CAF 497
CAF
Sbjct: 362 CAF 364
>AC018758-3|AAG09061.1| 464|Homo sapiens XRCC1 DNA repair protein
protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 134 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 192
Query: 505 CAF 497
CAF
Sbjct: 193 CAF 195
>AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross
complementing protein 1 variant protein.
Length = 647
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 679 GTRARPPRGXXXGLDA--RAWRFVLSGYQNPLRQELPPXRGSRWGRAGSPSGGPACTHLI 506
GT R PR L + VLSG+QNP R EL + G P THLI
Sbjct: 317 GTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSEL-RDKALELGAKYRPDWTRDSTHLI 375
Query: 505 CAF 497
CAF
Sbjct: 376 CAF 378
>DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGPACTHLICAFPQ 491
PLRQ+ PP GRAGSP G P FP+
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPE 199
>BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGPACTHLICAFPQ 491
PLRQ+ PP GRAGSP G P FP+
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPE 199
>AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protein 1
protein.
Length = 827
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGPACTHLICAFPQ 491
PLRQ+ PP GRAGSP G P FP+
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPE 199
>AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ26816 fis, clone PRS06437. ).
Length = 508
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGPACTHLICAFPQ 491
PLRQ+ PP GRAGSP G P FP+
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPE 199
>AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis
stimulating protein of p53 protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGPACTHLICAFPQ 491
PLRQ+ PP GRAGSP G P FP+
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPE 199
>BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1
Query: 595 PLRQELPPXRGSRWGRAGSPSGGP 524
PLRQ+ PP GRAGSP G P
Sbjct: 165 PLRQQGPPTPFDFLGRAGSPRGSP 188
>BC111373-1|AAI11374.1| 395|Homo sapiens HMG2L1 protein protein.
Length = 395
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 219 PPXGPQVAPAARPQLCVPGLHRERYSLKERRQR 317
PP A AA P L +PGLH + +S K+++++
Sbjct: 362 PPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKK 394
>BC062413-1|AAH62413.1| 394|Homo sapiens HMG2L1 protein protein.
Length = 394
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 219 PPXGPQVAPAARPQLCVPGLHRERYSLKERRQR 317
PP A AA P L +PGLH + +S K+++++
Sbjct: 362 PPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKK 394
>AE006465-4|AAK61258.1| 402|Homo sapiens unknown protein.
Length = 402
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 577 PPXRGSRWGRAGSPSGGPACTH 512
PP RG WG+ G P+ G A H
Sbjct: 8 PPCRGGCWGQPGHPNTGGAAAH 29
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,332,324
Number of Sequences: 237096
Number of extensions: 1356516
Number of successful extensions: 3978
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3978
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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