Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C06
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 78 7e-15
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 69 3e-12
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 68 1e-11
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 67 1e-11
07_01_0252 + 1883709-1885306,1886338-1886466,1887319-1887341,188... 32 0.62
07_01_0130 - 963856-965454 29 4.4
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 29 5.8
05_03_0411 - 13622241-13622591,13622838-13623476,13624031-136241... 29 5.8
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 78.2 bits (184), Expect = 7e-15
Identities = 40/96 (41%), Positives = 54/96 (56%)
Frame = -2
Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
G T Q++ FTRVL+G I + A+FP+ G VLD AR +LW+
Sbjct: 537 GEPTPRQKECFTRVLQGHIALDQAVFPERTPGFVLDVLARSSLWKIGLDYRHGTGHGVGA 596
Query: 544 XLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
LNVHEGP +S+R Y + L G I+SNEPG+Y+
Sbjct: 597 ALNVHEGPQSISYR-YGNLTALQKGMIVSNEPGYYE 631
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = -3
Query: 363 KAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKE 184
K NL + G LGF LT VP Q + +D +L+ EI+++N YH V + +SP+L
Sbjct: 646 KEVNLPNSFGGVSYLGFEKLTFVPIQSKLVDLSLLSPSEINWINEYHDEVWEKVSPLLSG 705
Query: 183 RGLLKDLEWLEGQCIPI 133
L+WL P+
Sbjct: 706 H----SLDWLRKNTRPL 718
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = -2
Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
G + ++ +T VLKG I + SA+FP G G+ LD AR LW
Sbjct: 512 GKPSEHEKSCYTAVLKGHIALDSAVFPNGTTGHALDILARTPLWRSGLDYRHGTGHGIGS 571
Query: 544 XLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
LNVHEGP +S+RP + L +++EPG+Y+
Sbjct: 572 YLNVHEGPHLISFRPSARNIPLQASMTVTDEPGYYE 607
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = -3
Query: 432 GEYGIRHEDLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTD 253
G +GIR E+++ + K N + ++ +G L F +T P Q + ID +LT
Sbjct: 609 GSFGIRLENVLIV----------KEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTP 658
Query: 252 FEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 133
EI +VNAYH L P L E ++ EWL PI
Sbjct: 659 AEIEWVNAYHADCRKILQPYLNE----QEKEWLRKATEPI 694
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/96 (33%), Positives = 49/96 (51%)
Frame = -2
Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
G + ++ +T VLKG I + +A+FP G G+ +D AR LW
Sbjct: 434 GKPSEHEKSCYTAVLKGHIALDTAVFPNGTTGHAIDILARTPLWRSGLDYRHGTGHGIGS 493
Query: 544 XLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
LNVHEGP +S+RP + L +++EPG+Y+
Sbjct: 494 YLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYE 529
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = -3
Query: 432 GEYGIRHEDLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTD 253
G +GIR E+++ + K N + ++ +G L F +T P Q + ID +LT
Sbjct: 531 GSFGIRLENVLIV----------KEANTKFNFGDKGYLAFEHITWTPYQTKLIDTTLLTP 580
Query: 252 FEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 133
EI +VNAYH L P L E ++ EWL PI
Sbjct: 581 AEIEWVNAYHSDCRKILQPYLNE----QEKEWLRKATEPI 616
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/96 (33%), Positives = 49/96 (51%)
Frame = -2
Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
G + ++ +T VLKG I + +A+FP G G+ LD AR LW+
Sbjct: 460 GKPSEHEKSCYTAVLKGHIALDTAVFPNGTTGHALDILARTPLWKSGLDYRHGTGHGVGS 519
Query: 544 XLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
L VHEGP +S+RP + L +++EPG+Y+
Sbjct: 520 YLTVHEGPHQISFRPSARNVPLQASMTVTDEPGYYQ 555
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = -3
Query: 354 NLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGL 175
N + ++ +G L F +T P Q + IDA +L EI +VN YH L P L E
Sbjct: 573 NTKFNFGDKGYLAFEHITWAPYQTKLIDATLLAPAEIEWVNTYHSDCRRILQPYLNE--- 629
Query: 174 LKDLEWLEGQCIPIT 130
++ EWL PIT
Sbjct: 630 -QEKEWLRKATEPIT 643
>07_01_0252 +
1883709-1885306,1886338-1886466,1887319-1887341,
1887455-1888023
Length = 772
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 660 AALYSRKA---LRATFWTASRVTPCGR-WAWTTATGRVTEWATTSTCTRVRPGSRGVR 499
A L+S +A +RA W A RV PCG WA T G T + R R G+R R
Sbjct: 39 AGLFSLRASLGIRAREWPA-RVDPCGGGWAGVTCRGGRVVGVTVAGFRRTRVGARAPR 95
>07_01_0130 - 963856-965454
Length = 532
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 207 TLSPILKERGLLKDLEWLEGQCIPITRK*TLKKLGSLVQQICKIWFLCESER 52
T S L RGL D E L+ +C+PI +K T+ + ++ C++ E ++
Sbjct: 416 TRSYFLLRRGLGDDFE-LKTKCVPIPKKNTVVQQYCVISDYCRVGVAHEEDQ 466
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 293 GTKVNVLKPKTPRPS*SPLRFFALG*SLPLSTATISIRSSWRIPYSPNFVEARFVAQ-YL 469
G ++ +L+ P PS SPLR+ +G +PL+ S S+ + P ++ A V + +L
Sbjct: 37 GLRLRLLRFSFPSPSSSPLRWVRVGNLVPLNEGNAS-SSNGSVSSIPIYLGANVVGRNHL 95
Query: 470 SNVQSRI 490
V R+
Sbjct: 96 VVVDKRV 102
>05_03_0411 -
13622241-13622591,13622838-13623476,13624031-13624177,
13624364-13624486,13624609-13624784,13625168-13625444
Length = 570
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 383 STATISIRSSWRIPYSPNFVEARFVAQYLSNVQSRIVGVRTPRDPGRTLVHVEVVAHSVT 562
+ +TISIRS+ P+SP + N + R V V G +V +V H +T
Sbjct: 163 NASTISIRSASLQPFSPEQWNQHREDRIQLN-RKRFVNVHVADSNGSRVVGAKVAVHQIT 221
Query: 563 R 565
R
Sbjct: 222 R 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,874,689
Number of Sequences: 37544
Number of extensions: 419675
Number of successful extensions: 1201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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