Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C06
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    68   7e-12
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    57   2e-08
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    31   0.97 

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = -2

Query: 691 TRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLNVHEGPSGV 512
           T VLKG I +  A FP G+ G+ LD+  R ALW+                LNVHEGP G+
Sbjct: 443 TLVLKGHINLARAKFPDGIYGSRLDTLTRDALWKLGLDFEHGTGHGVGHYLNVHEGPIGI 502

Query: 511 SWRPYPDDPGLNVGQILSNEPGFY 440
             R  P    L+  Q+L+ EPGFY
Sbjct: 503 GHRSVPTGGELHASQVLTIEPGFY 526



 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 38/99 (38%), Positives = 53/99 (53%)
 Frame = -3

Query: 429 EYGIRHEDLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILTDF 250
           +YGIR E+  E V     S   KA+N          L F +LTLVP Q   +D  +L + 
Sbjct: 530 KYGIRIENCYETVEAVVMS---KAQNF---------LTFKSLTLVPIQTSIVDKSLLIEE 577

Query: 249 EISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQCIPI 133
           EI+++N YH RVL  +   L++RG   +L+WL   C PI
Sbjct: 578 EINWLNQYHARVLKEVGEHLQKRGKTDELKWLAEACKPI 616


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = -2

Query: 715  TAEQRDAFTRVLKGQIMIGSALFPKGVK-GNVLDSFARHALWEXXXXXXXXXXXXXXXXL 539
            T E  + +T VLKG I + SA FPK +  G+ LD FAR ALW+                L
Sbjct: 879  TEEFMNQYTLVLKGHIRLASASFPKTLTYGSRLDIFARIALWDAGLDYDHETGHSVGHFL 938

Query: 538  NVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK--VRGIR 422
            N+ +    +   PY  +  +  GQ+++ EPG+Y   + GIR
Sbjct: 939  NIRDTQIVIGREPYSSNSIIEAGQVMTIEPGYYSEGMYGIR 979



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = -3

Query: 321  LGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLEGQC 142
            L F  LTL+P Q   ++ ++LT  EI+++N YH +V   +  IL++   +++ +WL   C
Sbjct: 999  LRFEPLTLIPIQTSIVNKDLLTSEEINWLNKYHFKVFSKIGYILRKENRMEEYDWLFNAC 1058

Query: 141  IPI 133
             PI
Sbjct: 1059 QPI 1061


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
            protein Y47D3A.29 protein.
          Length = 1428

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 438  KFGEYGIRHEDLIEIVAVDKGSDHP 364
            K G++ +RH D++E V  + G+D+P
Sbjct: 1128 KSGKFNLRHNDIVEYVICEDGTDNP 1152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,472,228
Number of Sequences: 27780
Number of extensions: 355132
Number of successful extensions: 1040
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)