Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C05
(815 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.84
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 24 1.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 1.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 4.5
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 7.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.8
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 7.8
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 7.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.84
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 151 HHASHHGQPHASAGFPHIRPSFPSTV 228
HH SH PH P S+P+ +
Sbjct: 432 HHHSHAATPHHQHSTPLAHSSYPAAI 457
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 24.2 bits (50), Expect = 1.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -3
Query: 438 LWALGGCDAWHCLSSTETLTINGGQSWSPGPPLPTARRSVGGCVWGSRLISAGGSDGAAS 259
L L G H LSS+ + G + L + RRSV C G +A + AS
Sbjct: 134 LHGLHGLHGLHGLSSSAPTGSSCGPGAAAAAALLSKRRSVSECSLG----TASSTSSTAS 189
Query: 258 LRRTD 244
R +D
Sbjct: 190 SRNSD 194
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.5
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 139 SHRVHHASHH 168
+H VHHA+HH
Sbjct: 278 NHHVHHANHH 287
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.6 bits (46), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 366 GPHLWSESQWTTSSAMRHSLPVPTKIPPTTLQSI 467
G HL + S SLP P PTT+Q +
Sbjct: 137 GNHLPFHEKLVESFPRGGSLPTPVTPTPTTVQQL 170
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 458 PEHCDR-PALRGGASVHLSSAAEYFNTLFRLTPPAQ--PPMMYRFSPP 592
P +C P G + + F + LTP + PP YRF PP
Sbjct: 121 PIYCGNFPPRPMGPWISIQEQIPRFRHIGPLTPFPRFIPPNAYRFRPP 168
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +2
Query: 245 SVLRSEAAPSEPPAEM---SLDPHT 310
+++ +E APS PP + LD HT
Sbjct: 968 TIITAEEAPSGPPTSIRVDDLDQHT 992
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 458 PEHCDR-PALRGGASVHLSSAAEYFNTLFRLTPPAQ--PPMMYRFSPP 592
P HC P G + + F + TP + PP YRF PP
Sbjct: 349 PIHCGNFPPRPMGPWISIQEQVPRFRYIGPPTPFPRFIPPNAYRFRPP 396
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 458 PEHCDR-PALRGGASVHLSSAAEYFNTLFRLTPPAQ--PPMMYRFSPP 592
P +C P G + + F + LTP + PP YRF PP
Sbjct: 362 PIYCGNFPPRPMGPWISIQEQIPRFRHIGPLTPFPRFIPPNAYRFRPP 409
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 480 R*GEGPLSICLQQPNTSILFS 542
R GE P+ C + SILFS
Sbjct: 408 RNGENPIDTCEMFDSVSILFS 428
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 375 LWSESQWTTSSAMRHSLPVPTK 440
L+S + ++ +RHS PVP K
Sbjct: 384 LYSVLPISVANELRHSRPVPAK 405
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 563 PPMMYRFSPP 592
PP +YRF PP
Sbjct: 381 PPNVYRFRPP 390
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 375 LWSESQWTTSSAMRHSLPVPTK 440
L+S + ++ +RHS PVP K
Sbjct: 384 LYSVLPISVANELRHSRPVPAK 405
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 499 CPFVFSSRILQYSFQVDPSGPAADDVQILSPRVDRRSGVR 618
C +++R + GP+ D + ++SPR+ + G+R
Sbjct: 533 CVIQYNTRAENHQTGTAKMGPSYDPMAVVSPRL-KVHGIR 571
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,923
Number of Sequences: 438
Number of extensions: 5345
Number of successful extensions: 89
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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