Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C03
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    54   6e-07
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   5.0  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   8.7  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   8.7  
AL356489-1|CAC88180.1|  130|Homo sapiens T cell receptor beta va...    30   8.7  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 54.0 bits (124), Expect = 6e-07
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +1

Query: 586 MIGRADIEGSKSNVAMNAWLPQASYP 663
           MIGRADIEGSKS+VAMNAW PQASYP
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYP 26


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 35  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 169
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 362 TPLRPKPA*PNPARICSLWSPESRE 288
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 362 TPLRPKPA*PNPARICSLWSPESRE 288
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL356489-1|CAC88180.1|  130|Homo sapiens T cell receptor beta
           variable 25/OR9-2 protein.
          Length = 130

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 508 SHDGLTPAHVPF*WVNNPTLGEFCF-AMIGRADIE 609
           S +G+TP H PF WVN+   G+ C  + + R  IE
Sbjct: 60  SRNGITP-HPPFLWVNSTEKGDLCSESTVSRIRIE 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,467,090
Number of Sequences: 237096
Number of extensions: 2669670
Number of successful extensions: 6306
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6299
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)