Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_B24
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p pro...    29   10.0 
AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-P...    29   10.0 
AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-P...    29   10.0 

>AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p protein.
          Length = 1524

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 588  EFAPGLKPPLSSEAPSAY--LTPSSLDMXKGVSPPYFQVN-DESQAS 457
            +  PG K P   + P     +TP  +D  K + PP F++N  ES AS
Sbjct: 959  QLPPGYKAPEPKDEPKLPPGVTPIKIDSLKDLLPPGFKLNVTESDAS 1005


>AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-PB,
            isoform B protein.
          Length = 1524

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 588  EFAPGLKPPLSSEAPSAY--LTPSSLDMXKGVSPPYFQVN-DESQAS 457
            +  PG K P   + P     +TP  +D  K + PP F++N  ES AS
Sbjct: 959  QLPPGYKAPEPKDEPKLPPGVTPIKIDSLKDLLPPGFKLNVTESDAS 1005


>AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-PA,
            isoform A protein.
          Length = 1524

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 588  EFAPGLKPPLSSEAPSAY--LTPSSLDMXKGVSPPYFQVN-DESQAS 457
            +  PG K P   + P     +TP  +D  K + PP F++N  ES AS
Sbjct: 959  QLPPGYKAPEPKDEPKLPPGVTPIKIDSLKDLLPPGFKLNVTESDAS 1005


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,669,234
Number of Sequences: 53049
Number of extensions: 663725
Number of successful extensions: 1563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)