Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B21
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0286 - 28988294-28988383,28988486-28989007,28989117-289897... 33 0.27
12_02_0356 + 17915029-17916236,17932970-17933283,17933936-179342... 31 1.5
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 30 2.6
11_03_0164 + 10972526-10972723,10972818-10973549,10974148-109742... 29 3.4
10_07_0044 + 12319382-12319532,12319978-12320163,12320247-123203... 29 3.4
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 29 3.4
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705... 29 4.5
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003... 29 4.5
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 29 5.9
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 29 5.9
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 29 5.9
11_06_0717 - 26575009-26575152,26576461-26577978 28 7.8
06_01_0351 + 2537022-2538281 28 7.8
06_01_0283 + 2083627-2084334,2085759-2085986 28 7.8
04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648 28 7.8
01_06_1506 + 37830468-37830600,37830703-37830920,37832078-378325... 28 7.8
>05_07_0286 -
28988294-28988383,28988486-28989007,28989117-28989758,
28990554-28990597,28990836-28991016
Length = 492
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -1
Query: 400 GNXEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTR---SRKRRL 230
G E T V + G GRA + + K+ + K+ T+ +++ + RMT R RR
Sbjct: 210 GGVSESTTLVQQADGGGGRAEKAGEQGKSGRRKRPRTVKTSEEVESQRMTHIAVERNRRR 269
Query: 229 EVSXSPSEVKSIVP 188
+++ ++S++P
Sbjct: 270 QMNEYLRVLRSLMP 283
>12_02_0356 +
17915029-17916236,17932970-17933283,17933936-17934244,
17934613-17935439
Length = 885
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = -3
Query: 482 LRSRGKADGRVTKESIENEXXXXXXXXXXXRGDNQAGAQGEGAKRTRHETSQRTQND--- 312
+ +GK V E +E E G +G + R R+ +T +
Sbjct: 194 VEDKGKTKVNVANEDLEEEIALLARRFNDLLGKRNERGRGSNSNRRRNRRPNKTLTNLRC 253
Query: 311 -QSEEKGNFDLESTGRSDAHDEVQEATAGGQXL 216
+ EKG+F + + D D+ + +GG L
Sbjct: 254 FECGEKGHFASKCPSKDDDGDKSSKKKSGGYKL 286
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -3
Query: 377 AGAQGEGAKRTRHETSQRTQNDQSEEKGN--FDLESTGRSDAHDE-VQEATAGGQXLAFG 207
AGAQGE ++ E + D E+K F + ++G HD+ QE + G + FG
Sbjct: 135 AGAQGEDGEKGDVEGEAAVEGDGEEKKEQEPFAVPTSGAFYMHDDRFQEESRGRRRRMFG 194
Query: 206 SEK 198
K
Sbjct: 195 GRK 197
>11_03_0164 +
10972526-10972723,10972818-10973549,10974148-10974285,
10974522-10974991,10975069-10975239,10975320-10975602,
10975682-10975795
Length = 701
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 624 QVAFPKVRAKKSKDSPVPRKRRKVDAPEANE 532
++ FP A S D+PVP RR D P+ E
Sbjct: 43 EIEFPAAPALLSIDAPVPSTRRMQDKPQQGE 73
>10_07_0044 +
12319382-12319532,12319978-12320163,12320247-12320396,
12320495-12320644,12320728-12321417,12321641-12322033,
12322073-12322546,12322634-12323974,12324042-12324388
Length = 1293
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 388 EITKPVLREKGQNGRATRQASERKTIKAKK-KETLTLNQQEDQMRMTRSRKRRLEVSXSP 212
E T P+ E ASE K ++++ +LT Q+ED+ R R +RR +
Sbjct: 104 EYTMPLQAEDAHGDVTNLSASELKNKRSREWYASLTKEQKEDRNRKARDARRRRKDESQG 163
Query: 211 SEVKSIVPAFS 179
+ K+ FS
Sbjct: 164 NVPKATTSKFS 174
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -2
Query: 582 SPVPRKRRKVDAP---EANERQLRSRGKRSTPATPVVEKPRKGRR*SHQGVD 436
S PRKR+K P + +R LR + P P +PR+ R + GVD
Sbjct: 2 SAPPRKRKKKGRPSLLDLQKRTLRLEKLQEPPPPPPPPQPRRSTRRNPAGVD 53
>03_06_0728 +
35768830-35769324,35769404-35769462,35770440-35770509,
35770626-35770748,35770836-35770964,35771268-35771717
Length = 441
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 624 QVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRK 466
+VA P ++++ + PR++RK D EA + R G P PVV + RK
Sbjct: 53 EVAEPSAKSRRDE----PRRKRKRDEVEAGHER-RRLGGAPAPPLPVVGEKRK 100
>02_05_0046 - 25398412-25398594,25399022-25399060,25399896-25400360,
25400758-25400816,25400920-25401748,25402554-25402898,
25402973-25403435,25403537-25403640,25403692-25403901,
25404933-25405088,25405774-25406052,25406237-25406986,
25407141-25407232,25407977-25408361,25408672-25408752,
25409196-25409354,25409399-25409506,25409604-25409666,
25409764-25409835,25409932-25410366
Length = 1758
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = -2
Query: 579 PVPRKRRKVDAPEANERQLRSRG-------KRSTPATPVVEKPRKGRR*SHQGVDRERKN 421
P RKRRKV++ ++++ RS KR+ E PR + H+ VD + +
Sbjct: 879 PAARKRRKVNSGSTSKKRKRSADEITLKFIKRNVETIESTE-PRPAQSIPHEEVDEDTIS 937
Query: 420 GPRHSQEEI 394
PR S+ I
Sbjct: 938 SPRISRSTI 946
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 367 REKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLE 227
REK + R RQ ERK + ++KE ++E + R +KRR E
Sbjct: 491 REKEEEERR-RQEEERKRREEEEKERREREEEERRQREKEEKKRREE 536
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 386 DNQAGAQGEGAKRTRHETSQRTQNDQSEEK 297
D + G E KR+RH+ + ++ND EEK
Sbjct: 133 DMRDGDDEEKKKRSRHDMKKNSRNDADEEK 162
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -2
Query: 609 KVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRKGRR*SHQGVDRE 430
K R+ S R+R+K + E + SR +++ + RK ++ +G D+E
Sbjct: 9 KRRSSPSSGEEEERERKK--RRDKKESRRSSRDEQAEEEEEEERRRRKKKKHGDRGKDKE 66
Query: 429 RKNGPRHSQEE 397
R + +HS+E+
Sbjct: 67 RDSKEKHSKEK 77
>11_06_0717 - 26575009-26575152,26576461-26577978
Length = 553
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 287 DLESTGRSDAHDEVQEATAGGQXLAFGSEKHRAGVL 180
++ + GR+DA+ +V + AGG + KH +G+L
Sbjct: 52 EMTTKGRADANAKVNQLKAGGDTKFLPALKHASGLL 87
>06_01_0351 + 2537022-2538281
Length = 419
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 542 RLMKGSCAVAVREAPPPLPWLRSRGKA 462
R + S V + PPPLPWL RG A
Sbjct: 73 RPWRSSARVELDLLPPPLPWLLLRGGA 99
>06_01_0283 + 2083627-2084334,2085759-2085986
Length = 311
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = -3
Query: 467 KADGRVTKESIENEXXXXXXXXXXXRGDNQAGAQGEGAKRTRHETSQRTQNDQSEEKGNF 288
+A+ V E I E G A E + E + + ++SEE+
Sbjct: 157 RAEEAVIVEKIRGEQIRRGVDPSEWVGGGAEEAMEEQEEEEEEEEEEEEEEEESEEEQGM 216
Query: 287 DLESTGR 267
D+E GR
Sbjct: 217 DMEEKGR 223
>04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648
Length = 857
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 597 KKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRKGRR 457
++ + P PR + V P+ ++Q + + P TP V+ P +GRR
Sbjct: 564 QQQQPRPAPRPQFVVRVPQPQQQQNQQGTRAPRPPTPTVQ-PVQGRR 609
>01_06_1506 +
37830468-37830600,37830703-37830920,37832078-37832529,
37832595-37833402,37834986-37835073,37835196-37835299,
37835402-37835483,37836670-37836923
Length = 712
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 570 RKRRKVDAPEANERQLRSRGKRSTPAT 490
RK+ K ++P A+ R RSR KRS +T
Sbjct: 670 RKKSKNNSPTASSRSSRSRSKRSFSST 696
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,828,026
Number of Sequences: 37544
Number of extensions: 341983
Number of successful extensions: 1468
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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