Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_B21
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          35   0.003
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        25   2.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   6.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.5  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   8.6  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   8.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   8.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   8.6  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 24/77 (31%), Positives = 37/77 (48%)
 Frame = -2

Query: 627 TQVAFPKVRAKKSKDSPVPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRKGRR*SH 448
           T+   P  R   +  +P  R+RR+  A  A  R+ R R +R+ PAT    + R  RR S 
Sbjct: 473 TRRTIPPTRVAAAAAAPEGRRRRRAIA-RARRRRCRPRARRNPPATTRPVRHRPTRRKST 531

Query: 447 QGVDRERKNGPRHSQEE 397
           +   ++ K   R S +E
Sbjct: 532 KRGKKDDKGYDRRSGKE 548


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 561 RKVDAPEANERQL-RSRGKRSTPATPVVEKPRKGR 460
           RK    +A  +QL R   ++S PAT  V+KP + R
Sbjct: 7   RKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYR 41


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/70 (15%), Positives = 36/70 (51%)
 Frame = -1

Query: 367  REKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSXSPSEVKSIVP 188
            +E G+  +  + + ++ +    +K  + L ++E+Q +    RK+ +E      ++++I+ 
Sbjct: 961  QEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVE--DDKKKIQAIIT 1018

Query: 187  AFSFESERRV 158
                E ++++
Sbjct: 1019 DLDEEKKKKL 1028


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 367  REKGQNGRATRQASERKTIKAKKKETLT 284
            RE+ + GR     S  +T  +K+K+++T
Sbjct: 1575 RERSKQGRKVSDQSSSQTSPSKRKDSVT 1602


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 576 VPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRKGRR*SHQGVDRER 427
           VPR  R     +  E Q R R ++ +     +EK RK +   H+ ++RER
Sbjct: 102 VPRAERAT-LKQQYEEQHRKRLEQQSKQR-AIEKDRKKKDEIHRQIERER 149


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 576 VPRKRRKVDAPEANERQLRSRGKRSTPATPVVEKPRKGRR*SHQGVDRER 427
           VPR  R     +  E Q R R ++ +     +EK RK +   H+ ++RER
Sbjct: 102 VPRAERAT-LKQQYEEQHRKRLEQQSKQR-AIEKDRKKKDEIHRQIERER 149


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = -3

Query: 341  HETSQRTQNDQSEEKGNFDLESTGRSDAHDEVQEATAG 228
            HE  +   N Q   +GN D E   +  A  E     AG
Sbjct: 978  HEVMENQYNLQCSYRGNSDRELQNQEAASQETSPERAG 1015


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/55 (14%), Positives = 30/55 (54%)
 Frame = -1

Query: 352 NGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSXSPSEVKSIVP 188
           +G+++ Q  E++    ++++     QQ+ Q    + ++++ ++    +++  +VP
Sbjct: 177 SGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQQQQQQQQRKIRRPKADLIEVVP 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,099
Number of Sequences: 2352
Number of extensions: 10334
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)