Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B19
(804 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 210 2e-54
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 210 2e-54
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 210 2e-54
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 210 2e-54
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 210 2e-54
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 210 bits (512), Expect = 2e-54
Identities = 97/119 (81%), Positives = 106/119 (89%)
Frame = -2
Query: 452 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 273
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 293 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 352
Query: 272 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 96
KRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 353 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411
Score = 139 bits (337), Expect = 4e-33
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -1
Query: 627 KGKGYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 448
KGKG+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKK
Sbjct: 235 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 294
Query: 447 IYRIG 433
IYRIG
Sbjct: 295 IYRIG 299
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 793 QRTKRRAHIYGNPNLTGGTIRGXK*NGAKXTFWRNLSLSILCLPXDEMIDCIGVTQGQ 620
++ +++AH+ L GG+I K A+ + + +S + DEMIDC+GVT+G+
Sbjct: 183 KQRQKKAHVM-EIQLNGGSIED-KVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGK 237
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 210 bits (512), Expect = 2e-54
Identities = 97/119 (81%), Positives = 106/119 (89%)
Frame = -2
Query: 452 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 273
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341
Query: 272 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 96
KRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 139 bits (337), Expect = 4e-33
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -1
Query: 627 KGKGYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 448
KGKG+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKK
Sbjct: 224 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 283
Query: 447 IYRIG 433
IYRIG
Sbjct: 284 IYRIG 288
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 793 QRTKRRAHIYGNPNLTGGTIRGXK*NGAKXTFWRNLSLSILCLPXDEMIDCIGVTQGQ 620
++ +++AH+ L GG+I K A+ + + +S + DEMIDC+GVT+G+
Sbjct: 172 KQRQKKAHVM-EIQLNGGSIED-KVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGK 226
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 210 bits (512), Expect = 2e-54
Identities = 97/119 (81%), Positives = 106/119 (89%)
Frame = -2
Query: 452 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 273
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328
Query: 272 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 96
KRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 139 bits (337), Expect = 4e-33
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -1
Query: 627 KGKGYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 448
KGKG+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKK
Sbjct: 211 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 270
Query: 447 IYRIG 433
IYRIG
Sbjct: 271 IYRIG 275
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 793 QRTKRRAHIYGNPNLTGGTIRGXK*NGAKXTFWRNLSLSILCLPXDEMIDCIGVTQGQ 620
++ +++AH+ L GG+I K A+ + + +S + DEMIDC+GVT+G+
Sbjct: 159 KQRQKKAHVM-EIQLNGGSIED-KVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGK 213
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 210 bits (512), Expect = 2e-54
Identities = 97/119 (81%), Positives = 106/119 (89%)
Frame = -2
Query: 452 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 273
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328
Query: 272 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 96
KRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 139 bits (337), Expect = 4e-33
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -1
Query: 627 KGKGYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 448
KGKG+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKK
Sbjct: 211 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 270
Query: 447 IYRIG 433
IYRIG
Sbjct: 271 IYRIG 275
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 793 QRTKRRAHIYGNPNLTGGTIRGXK*NGAKXTFWRNLSLSILCLPXDEMIDCIGVTQGQ 620
++ +++AH+ L GG+I K A+ + + +S + DEMIDC+GVT+G+
Sbjct: 159 KQRQKKAHVM-EIQLNGGSIED-KVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGK 213
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 210 bits (512), Expect = 2e-54
Identities = 97/119 (81%), Positives = 106/119 (89%)
Frame = -2
Query: 452 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 273
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341
Query: 272 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 96
KRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 139 bits (337), Expect = 4e-33
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -1
Query: 627 KGKGYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 448
KGKG+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKK
Sbjct: 224 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 283
Query: 447 IYRIG 433
IYRIG
Sbjct: 284 IYRIG 288
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 793 QRTKRRAHIYGNPNLTGGTIRGXK*NGAKXTFWRNLSLSILCLPXDEMIDCIGVTQGQ 620
++ +++AH+ L GG+I K A+ + + +S + DEMIDC+GVT+G+
Sbjct: 172 KQRQKKAHVM-EIQLNGGSIED-KVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGK 226
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,109,696
Number of Sequences: 53049
Number of extensions: 776700
Number of successful extensions: 2109
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -