BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_B18 (886 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0601 + 4423831-4424115,4424278-4424406,4424615-4424779,442... 30 2.8 05_04_0101 - 18003528-18003655,18003951-18003997,18004046-180040... 29 3.8 07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406... 29 5.0 02_05_0040 + 25341418-25341810 29 5.0 07_03_0658 - 20366559-20367562,20367745-20367937 29 6.6 06_03_0108 - 16732215-16732572,16732623-16732741,16733344-167333... 29 6.6 06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 29 6.6 01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 28 8.7 >03_01_0601 + 4423831-4424115,4424278-4424406,4424615-4424779, 4424925-4425230,4425387-4425448,4425776-4426145, 4426427-4426555,4427233-4427397,4427534-4427839, 4427928-4428068 Length = 685 Score = 29.9 bits (64), Expect = 2.8 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = +1 Query: 604 RPXLESGGWIGPGVFYGGQNSVDG----VSRRSDGSL-NELCLYRPPTVHAYRPFA 756 +P L SGGWIG G GG +++ G V + G L LC HA R FA Sbjct: 332 KPALTSGGWIGGG---GGDSTMGGGMRVVVTGATGYLGGRLCAALAAAGHAVRAFA 384 >05_04_0101 - 18003528-18003655,18003951-18003997,18004046-18004077, 18004316-18004453,18004579-18004619,18004967-18005105, 18010981-18011057,18011804-18011858,18012976-18013021, 18013099-18013187,18013304-18013417 Length = 301 Score = 29.5 bits (63), Expect = 3.8 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 13 YKXKLGYAYSLGPSXGYSRXGRDLQLEHMVPL 108 + LGY Y GPS SR G + LE+ + L Sbjct: 226 FSGSLGYDYGYGPSGNSSRHGNTVYLENNIRL 257 >07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578, 40657-40833 Length = 632 Score = 29.1 bits (62), Expect = 5.0 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -1 Query: 541 YRTSLYKKAGWYRSGIPRALCDIHCAGADSLSLISWW 431 Y+TSL + G ++ G+PR C AG D L W Sbjct: 285 YQTSLSPRCGAFKDGVPRMSC-AKIAGRDKLKRRGDW 320 >02_05_0040 + 25341418-25341810 Length = 130 Score = 29.1 bits (62), Expect = 5.0 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +2 Query: 119 RRAAPA*SCGHSRSEMSASRRRLSAPNAYDSPP 217 RRAAP CG S+ S +RR AP S P Sbjct: 74 RRAAPRRRCGGSKRRCSGPQRRRGAPRRRCSGP 106 >07_03_0658 - 20366559-20367562,20367745-20367937 Length = 398 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/56 (28%), Positives = 23/56 (41%) Frame = +3 Query: 174 VVVGSRHRMRMILRQHGFGQCVEQRPLVPEVPVKRRLLNPQPFRQFACRQTVYADL 341 V+ G+ H + M L +HG V + L+P L FRQ + DL Sbjct: 251 VIPGTEHALNMRLTEHGLDGHVSIKDLIPLAAANADELLSDAFRQLGLAGVEWNDL 306 >06_03_0108 - 16732215-16732572,16732623-16732741,16733344-16733393, 16734619-16734820 Length = 242 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +1 Query: 619 SGGWIGPGVFYGGQNSVDGVSRRSDGS 699 SGG GP V YGG+ GV R+ D S Sbjct: 143 SGG-TGPAVDYGGRGDSGGVRRKEDSS 168 >06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 Length = 542 Score = 28.7 bits (61), Expect = 6.6 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -1 Query: 604 AGRITISHRKQL*P-LGLFR*HYRTSLYKKAGWY 506 AG + +SH + P L +FR ++ L+K GWY Sbjct: 130 AGFLVLSHHAGVPPSLAVFRHFFKLCLFKSNGWY 163 >01_07_0353 + 42962769-42962972,42963062-42963138,42963571-42963817, 42963907-42964476,42964998-42965171,42965514-42965640, 42965719-42965828,42966707-42966907,42966999-42967966, 42968110-42968358,42968760-42969105 Length = 1090 Score = 28.3 bits (60), Expect = 8.7 Identities = 14/48 (29%), Positives = 20/48 (41%) Frame = +1 Query: 640 GVFYGGQNSVDGVSRRSDGSLNELCLYRPPTVHAYRPFASMGRSCYDI 783 G Y ++ VDG S R+ N P VH Y G++ D+ Sbjct: 719 GSVYDSESEVDGSSDRNAADSNTKDNQEDPLVHVYDASVDQGQTARDV 766 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,960,434 Number of Sequences: 37544 Number of extensions: 511533 Number of successful extensions: 1183 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1182 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2503236492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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