Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_B17
         (819 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.1  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   3.7  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   4.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   6.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.6  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 563 SNDARLRCDLVDLYYTLYGAKRPICCPLPEIQ 468
           +ND    C+   LY+ L+G  RP+      IQ
Sbjct: 191 NNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQ 222


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 206 SSRPPL*YWTAEPEARSHLSRPFYCPIALYSSLDQSS 316
           SS P   +  A P    HL+ P   P+AL SS   S+
Sbjct: 705 SSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSAST 741


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 79  KPMGPEVPGIP 111
           +PMGP VPG+P
Sbjct: 92  QPMGPPVPGVP 102


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 562 RTTLVSGATLWTCITRCTALNALFAVRYPKY 470
           R  L + + +  C+TRC   +A+  V   KY
Sbjct: 51  RKRLTASSAVNACLTRCAFTDAVTTVEVSKY 81


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 647 PPFERAQR--HRLDSETVVHRIWNNIN 573
           P   RA R  H L++E V+H +W N++
Sbjct: 223 PGRPRATRYVHVLNAEIVLHDLWGNVD 249


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 116 LPGIPGTSGPIGFEPGMFRPLKDELGAP 33
           LPG+ G  GP+G +      +K E G P
Sbjct: 525 LPGMKGDMGPLGEKGDACPVVKGEKGLP 552


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 251 RSHLS-RPFYCPIALYSSLDQSSIRISRH 334
           R+H   +PF CP   Y+S D+   +++RH
Sbjct: 232 RTHTGEKPFQCPHCTYASPDK--FKLTRH 258


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 113 PGIPGTSGPIGFE 75
           PG PG  GP G+E
Sbjct: 410 PGAPGPKGPRGYE 422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,434
Number of Sequences: 2352
Number of extensions: 14038
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)