Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B17
(819 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 85 4e-16
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 85 4e-16
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 85 4e-16
BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain con... 31 6.6
BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain con... 31 6.6
BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.6
BC023549-1|AAH23549.1| 830|Homo sapiens Fas (TNFRSF6) binding f... 31 6.6
BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.6
AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.6
AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2 (Dros... 31 6.6
AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens ... 31 6.6
AK074045-1|BAB84871.1| 678|Homo sapiens FLJ00103 protein protein. 31 6.6
AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein. 31 6.6
AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein. 31 6.6
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 8.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 8.8
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 84.6 bits (200), Expect = 4e-16
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = -2
Query: 725 RYLXAVEERXPTPGVRHGLARLLVDTPPFERAQRHRLDSETVVHRIWNNINSNLSNDARL 546
++L + + P P VRH + +L PPF + L +E +V ++W +NS S+D RL
Sbjct: 908 QWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRL 967
Query: 545 RCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
RC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 968 RCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 84.6 bits (200), Expect = 4e-16
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = -2
Query: 725 RYLXAVEERXPTPGVRHGLARLLVDTPPFERAQRHRLDSETVVHRIWNNINSNLSNDARL 546
++L + + P P VRH + +L PPF + L +E +V ++W +NS S+D RL
Sbjct: 898 QWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRL 957
Query: 545 RCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
RC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 958 RCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 992
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 84.6 bits (200), Expect = 4e-16
Identities = 37/95 (38%), Positives = 56/95 (58%)
Frame = -2
Query: 725 RYLXAVEERXPTPGVRHGLARLLVDTPPFERAQRHRLDSETVVHRIWNNINSNLSNDARL 546
++L + + P P VRH + +L PPF + L +E +V ++W +NS S+D RL
Sbjct: 908 QWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRL 967
Query: 545 RCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 441
RC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 968 RCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain
containing 4 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 344 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 180
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 749 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 808
Query: 179 IPLRVFNDDSKREFSSDNAVALP 111
P F D S E S A + P
Sbjct: 809 APPPGFRDSSDEEDSQSQAASFP 831
>BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain
containing 4 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 344 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 180
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 749 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 808
Query: 179 IPLRVFNDDSKREFSSDNAVALP 111
P F D S E S A + P
Sbjct: 809 APPPGFRDSSDEEDSQSQAASFP 831
>BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>BC023549-1|AAH23549.1| 830|Homo sapiens Fas (TNFRSF6) binding
factor 1 protein.
Length = 830
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 631 ARSKGGVSTSRRARPCRTPGVGXRSSTAXKXRRQVPRASRPRGT 762
A + G T+ R RPC PGV T +P S RGT
Sbjct: 473 AAAGGSSGTTARERPCVRPGVSGSPVTQNHAASALPTGSPKRGT 516
>BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 369
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 126 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 172
>AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ35070 fis, clone PLACE5000139. ).
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AK074045-1|BAB84871.1| 678|Homo sapiens FLJ00103 protein protein.
Length = 678
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 631 ARSKGGVSTSRRARPCRTPGVGXRSSTAXKXRRQVPRASRPRGT 762
A + G T+ R RPC PGV T +P S RGT
Sbjct: 489 AAAGGSSGTTARERPCVRPGVSGSPVTQNHAASALPTGSPKRGT 532
>AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 176 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein.
Length = 1379
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 344 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 180
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 806 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 865
Query: 179 IPLRVFNDDSKREFSSDNAVALP 111
P F D S E S A + P
Sbjct: 866 APPPGFRDSSDEEDSQSQAASFP 888
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 122 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2359 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2386
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 122 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 33
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2391 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,581,138
Number of Sequences: 237096
Number of extensions: 2124080
Number of successful extensions: 9248
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9152
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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