Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_B17
         (819 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   5.9  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   7.8  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   7.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 221 EEDVKIDVTTVSTEIPLRVFNDDSKREFSSDNAVALPG 108
           E+ +K+D        PLR   D   RE+ + NA    G
Sbjct: 299 EKRLKLDEDADGAVSPLRREKDRGSREYPTSNATDTDG 336


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 212 RPPL*YWTAEPEARSHLSRPFYCP 283
           RPP      EPEA    +RP Y P
Sbjct: 110 RPPHPRLRREPEAEPGNNRPVYIP 133



 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 212 RPPL*YWTAEPEARSHLSRPFYCP 283
           RPP      EPEA    +RP Y P
Sbjct: 136 RPPHPRLRREPEAEPGNNRPVYIP 159


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 194 SLRQSSRPPL*YWTAEPEARSHLSRPFYCP 283
           +L   +RP      AEPEA    +RP Y P
Sbjct: 22  NLDPPTRPTRLRREAEPEAEPGNNRPVYIP 51



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 64  AEPEAEPGNNRPVYIP 79



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 92  AEPEAEPGNNRPVYIP 107



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 120 AEPEAEPGNNRPVYIP 135


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 63  AEPEAEPGNNRPVYIP 78



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 119 AEPEAEPGNNRPVYIP 134



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 175 AEPEAEPGNNRPVYIP 190



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 203 AEPEAEPGNNRPVYIP 218



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 231 AEPEAEPGNNRPVYIP 246


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 35  AEPEAEPGNNRPVYIP 50



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 63  AEPEAEPGNNRPVYIP 78



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 91  AEPEAEPGNNRPVYIP 106



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 119 AEPEAEPGNNRPVYIP 134



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 236 AEPEARSHLSRPFYCP 283
           AEPEA    +RP Y P
Sbjct: 175 AEPEAEPGNNRPVYIP 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,172
Number of Sequences: 438
Number of extensions: 3757
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)