Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B14
(815 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 139 7e-32
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 135 1e-30
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 132 8e-30
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 113 5e-24
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 107 3e-22
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 81 2e-14
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 81 3e-14
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 78 3e-13
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 75 2e-12
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 74 5e-12
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 68 3e-10
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 65 2e-09
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 64 5e-09
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 62 1e-08
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 61 3e-08
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 61 4e-08
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 59 1e-07
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 56 1e-06
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 55 2e-06
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 54 4e-06
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 54 4e-06
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 53 8e-06
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 52 1e-05
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 51 3e-05
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.70
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 36 1.6
UniRef50_Q6AGQ9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q9P0F5 Cluster: HSPC081; n=1; Homo sapiens|Rep: HSPC081... 35 2.1
UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;... 35 2.1
UniRef50_Q2BFU2 Cluster: RTX toxins and related Ca2+-binding pro... 34 4.9
UniRef50_UPI000051A196 Cluster: PREDICTED: similar to Toll-6 CG7... 33 6.5
UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal pr... 33 8.6
UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32; Bacteri... 33 8.6
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 139 bits (337), Expect = 7e-32
Identities = 58/65 (89%), Positives = 65/65 (100%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKGYKGVTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGYHHRTE+NKK
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283
Query: 444 IYRIG 430
IY+IG
Sbjct: 284 IYKIG 288
Score = 111 bits (267), Expect = 2e-23
Identities = 67/161 (41%), Positives = 93/161 (57%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYP 570
IQ+NGGT+ + + + + +PV+ VF QDEMID IGVT+G V+ T++ P
Sbjct: 183 IQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK-LP 241
Query: 569 VRHTRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVIKN 390
+ R L K+ + +K + +K + QG KDGK+IKN
Sbjct: 242 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 301
Query: 389 NASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
NAST+YDLS+KSI P+GGF HYGEV NDFVM++G + GT K
Sbjct: 302 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKK 342
Score = 106 bits (255), Expect = 6e-22
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KGC +G KKR++TLRKSL V TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LK
Sbjct: 334 KGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
Query: 112 KDRIREE 92
KDRI +E
Sbjct: 394 KDRIAKE 400
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2
Query: 787 LLKQRQKKXHIMESNLTGVPFEDKVKWAREHLE 689
LL RQKK H+ME + G +K+ WARE LE
Sbjct: 170 LLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 135 bits (326), Expect = 1e-30
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
RG G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 444 IYRIG 430
IYRIG
Sbjct: 236 IYRIG 240
Score = 96.3 bits (229), Expect = 8e-19
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 112 KDRIRE 95
+D + E
Sbjct: 343 RDFLAE 348
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = -1
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
KNN STE+DL++K+ITPMGGFP YG VN D++M++G + G
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 132 bits (320), Expect = 8e-30
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+G+G KGVTSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTE+NKK
Sbjct: 224 KGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKK 283
Query: 444 IYRIGXRNP 418
I+RIG R P
Sbjct: 284 IFRIG-RGP 291
Score = 112 bits (269), Expect = 1e-23
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYP 570
IQLNGGT+ + Q + +PV SVF+Q E+ID I VT+G V+ T++ P
Sbjct: 183 IQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK-LP 241
Query: 569 VRHTRVLGKLPALELG--ILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVI 396
+ + L K+ + +GC +K + +K + +G H +DGK++
Sbjct: 242 RKTHKGLRKVACIGAWHPARVGCSIA--RAGQKGYHHRTELNKKIFRIGRGPHMEDGKLV 299
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
KNNAST YD++ KSITP+GGFPHYGEVNNDFVM++G + GT K
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKK 342
Score = 91.9 bits (218), Expect = 2e-17
Identities = 44/66 (66%), Positives = 49/66 (74%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KGC G KKR+ITLRKSL VH R A+E I LKFIDT+SKFGHGRFQT +K AFMG K
Sbjct: 334 KGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
Query: 112 KDRIRE 95
K +E
Sbjct: 394 KHLEKE 399
Score = 37.1 bits (82), Expect = 0.53
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 790 ELLKQRQKKXHIMESNLTGVPFEDKVKWAREHLE 689
+LL RQKK HIME L G +KV WA+ LE
Sbjct: 169 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLE 202
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 113 bits (272), Expect = 5e-24
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+G G+ GV RW LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHHRT +NKK
Sbjct: 278 KGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKK 337
Query: 444 IYRIG 430
IY++G
Sbjct: 338 IYQLG 342
Score = 86.6 bits (205), Expect = 7e-16
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KG GP++R+ITLR+ + T R EKI LKFIDTSSK GHGRFQT +K+ + G LK
Sbjct: 383 KGSVAGPRRRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 442
Query: 112 KDRIREE 92
KDRIR E
Sbjct: 443 KDRIRRE 449
Score = 67.7 bits (158), Expect = 3e-10
Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYP 570
IQ+NGGTI + E+ + + + +DSVF Q E D VT+G T V G P
Sbjct: 237 IQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVA-CLP 295
Query: 569 VRHTRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKD---GKV 399
+ R L K+ + G R V+ TV + + ++KK G+
Sbjct: 296 RKTHRGLRKVACI--GAWHPSR---------VMYTVARAGQHGYHHRTHLNKKIYQLGRA 344
Query: 398 IK---NNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
+ N A+T YDL+ K+ITPMGGF YG V ND+VM++G + G
Sbjct: 345 VSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAG 388
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 107 bits (257), Expect = 3e-22
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+G G KGV SRW +LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT NKK
Sbjct: 206 KGHGTKGVVSRWGITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKK 265
Query: 444 IYRIG 430
IY+IG
Sbjct: 266 IYKIG 270
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 125
KG G KR I LRK+++ EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 310 KGSMTGSSKRPILLRKNIKNKISSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
Score = 42.3 bits (95), Expect = 0.014
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = -1
Query: 737 GGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHT 558
GG+ + + E + + + I ++S+F ++++ID IG+T+G V G R P +
Sbjct: 169 GGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRWGITR-LPRKTH 227
Query: 557 RVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVIKNNAST 378
R L K+ + G R V T+ + +K +KK K+ +
Sbjct: 228 RGLRKVACI--GPWTPSR---------VAWTISRAGQKGYHKRTLFNKKIYKIGSEENFS 276
Query: 377 EYD--LSE---KSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
Y LS+ KS+ MGGF +G +NND+++I+G + G+ K
Sbjct: 277 YYSNSLSDSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSK 318
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -2
Query: 280 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 101
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 100 REE 92
+E
Sbjct: 148 AKE 150
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG +G RW K K KG RKV IG WHP+RV +TV AGQ G+HHRTE+NK+
Sbjct: 226 KGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKR 285
Query: 444 IYRIGXRNPQK 412
+ IG K
Sbjct: 286 LIAIGENGKLK 296
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -1
Query: 365 SEKSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
+E ITP GGFPHYG V +DF+MI G + G K
Sbjct: 301 TEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIK 333
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
K C +G KKR+++L KSL + TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LK
Sbjct: 279 KDCLVGTKKRVLSLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLK 338
Query: 112 KD 107
KD
Sbjct: 339 KD 340
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GK YKG++S W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKK
Sbjct: 179 KGKHYKGISSHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKK 231
Query: 444 IYRIG 430
IY+IG
Sbjct: 232 IYKIG 236
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1
Query: 449 RKSIVLXQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHGT* 270
+K + QG K+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM++ L GT
Sbjct: 230 KKIYKIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTK 286
Query: 269 K 267
K
Sbjct: 287 K 287
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M++G + GT K
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKK 47
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEK 206
KGC +G KKR++TLRKSL V TKR ALEK
Sbjct: 39 KGCVVGTKKRVLTLRKSLLVQTKRRALEK 67
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG++GV R+H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE NK
Sbjct: 196 KGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKL 255
Query: 444 IYRIG-XRNPQKGWQSY 397
I +IG N + GW Y
Sbjct: 256 IIKIGEPLNVEGGWVRY 272
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 73.7 bits (173), Expect = 5e-12
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+G GYKGVT + P + +G K+ C+GAWHP+RV+F+VA+ GQKGYHH + NKK
Sbjct: 204 KGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGYHHNGD-NKK 261
Query: 444 IYRIG 430
I +IG
Sbjct: 262 ICKIG 266
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = -1
Query: 449 RKSIVLXQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQG 288
+K + QG KDGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+ ++G
Sbjct: 260 KKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKG 313
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KGC + KK + T+ K L V T + AL+KI+ K DT+ K GHG FQT K AF+G LK
Sbjct: 312 KGCAVRTKKHL-TICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLK 370
Query: 112 KDRIREE 92
K+ EE
Sbjct: 371 KECTAEE 377
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG++GV RW+ KK K+ K +R+V +G P V +TV RAGQ G+H R E +K+
Sbjct: 204 KGKGWQGVLKRWNVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKR 263
Query: 444 IYRIGXRNPQK 412
I +G + K
Sbjct: 264 IMIMGNTDDDK 274
Score = 33.5 bits (73), Expect = 6.5
Identities = 37/156 (23%), Positives = 66/156 (42%)
Frame = -1
Query: 743 LNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVR 564
++GG I Q + G+ I +D +F +D +T+G K + G + + V+
Sbjct: 165 VSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKG-KGWQ-----GVLKRWNVK 218
Query: 563 HTRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVIKNNA 384
+ + E+G SL + + V+ TV + Q + +I N
Sbjct: 219 KKQHKSRKTVREVG------SLGPISPQSVMYTVPR--AGQFGFHQRVEYDKRIMIMGNT 270
Query: 383 STEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
D + I P GGF H+G V DF++++G + G
Sbjct: 271 ----DDDKLKINPDGGFKHFGLVKGDFIVLKGSVPG 302
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG++GV RW RKT + R + IG PSRV +TV AGQ GYH RTE N
Sbjct: 209 KGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHN 268
Query: 450 KKIYRIG 430
K+I +IG
Sbjct: 269 KRILKIG 275
Score = 35.5 bits (78), Expect = 1.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 359 KSITPMGGFPHYGEVNNDFVMIQGLLHG 276
+ +TP GGF +YG V D++MI G + G
Sbjct: 279 EEVTPRGGFVNYGVVRGDYIMIHGTVPG 306
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG++G RW K + + KG+ R V IG W P V ++V GQ GYH RTE N
Sbjct: 203 KGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYN 262
Query: 450 KKIYRIG 430
K+I +IG
Sbjct: 263 KRILKIG 269
Score = 36.7 bits (81), Expect = 0.70
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -1
Query: 353 ITPMGGFPHYGEVNNDFVMIQGLLHG 276
ITP GGF HYG + N++V+++G + G
Sbjct: 275 ITPKGGFLHYGVIRNNYVVLKGSVQG 300
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG++GV R K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+
Sbjct: 202 KGKGWQGVIQRMGAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKR 261
Query: 444 IYRIG 430
I +G
Sbjct: 262 IMAVG 266
Score = 34.3 bits (75), Expect = 3.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 362 EKSITPMGGFPHYGEVNNDFVMIQGLLHGT 273
+ +I P GG+ H+G V D+++++G + GT
Sbjct: 271 DDAINPSGGYKHFGMVKGDYIVLKGSVPGT 300
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG +G RW +K K +G R+ + +G W+PSRV TV + GQ GYH RTE+N
Sbjct: 205 KGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELN 264
Query: 450 KKIYRIGXRN---PQKGWQSY 397
K++ I + P G+ +Y
Sbjct: 265 KRLIDINDGDEPTPDGGFPNY 285
Score = 34.3 bits (75), Expect = 3.7
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 350 TPMGGFPHYGEVNNDFVMIQGLLHG 276
TP GGFP+YGEV+ + +++G + G
Sbjct: 277 TPDGGFPNYGEVDGPYTLVKGSVPG 301
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG+ G R+ K LPRK K R + +G WHP V TV +AGQ GY RT N +
Sbjct: 199 KGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVR 258
Query: 444 IYR 436
+ +
Sbjct: 259 VLK 261
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKG++GV R+ K L K K R++ +G + V T+ +AGQ GYH RTE+NK+
Sbjct: 228 KGKGWQGVIKRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKR 287
Query: 444 IYRI 433
I RI
Sbjct: 288 ILRI 291
Score = 40.3 bits (90), Expect = 0.057
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1
Query: 362 EKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
E +TP GGF HYGEV N +++++G L G
Sbjct: 296 ESDVTPAGGFLHYGEVTNPYMVLEGSLPG 324
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSF-TVARAGQKGYHHRTEM 454
+GKG++GV RW K+LPR K KG R+ IGA R +F +AGQ G+H RTE
Sbjct: 210 KGKGFQGVIKRWGVKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEY 266
Query: 453 NKKIYRI 433
NK+I I
Sbjct: 267 NKRILMI 273
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 353 ITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
+TP GGF YG V + FVM+ G + GT K
Sbjct: 280 VTPAGGFLRYGVVRSTFVMLSGSIPGTPK 308
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG++G R+ +++PR K KG ++ +G P+ + F GQ G+H RTE N
Sbjct: 201 KGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYN 259
Query: 450 KKIYRIGXR------NPQKGWQSY 397
K+I ++G NP GW Y
Sbjct: 260 KRILKVGDAESLKEINPPGGWPHY 283
Score = 37.5 bits (83), Expect = 0.40
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -1
Query: 365 SEKSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
S K I P GG+PHYG V + F++++G + G K
Sbjct: 270 SLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVK 302
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+G G +GV R+ K L K K R++ +G + V T+ +AGQ GYH RTE NK+
Sbjct: 208 KGYGNQGVVRRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKR 267
Query: 444 IYRI 433
I RI
Sbjct: 268 ILRI 271
Score = 42.7 bits (96), Expect = 0.011
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 362 EKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
E ITP GGF HYGEV N +++IQG L G
Sbjct: 276 ESQITPAGGFLHYGEVKNHYMIIQGSLPG 304
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+G G +G RW RK + +K V +G W+P R+ + V + GQ GYH RTE N
Sbjct: 206 KGYGTQGPVVRWGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYN 265
Query: 450 KKIYRIGXR 424
K+I ++G +
Sbjct: 266 KRILKMGDK 274
Score = 39.5 bits (88), Expect = 0.099
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -1
Query: 359 KSITPMGGFPHYGEVNNDFVMIQGLLHG 276
+ ITP GGF HYG + ND++M++G + G
Sbjct: 276 EEITPAGGFLHYGLIRNDYIMLKGSIPG 303
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 53.2 bits (122), Expect = 8e-06
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG++GV R+ K+LP+ K KG R+V +W S+ V + GQ GYH RT+ N
Sbjct: 227 KGKGFQGVIKRFGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYN 284
Query: 450 KKIYRIGXR----NPQKGWQSY 397
K++ I N + GW Y
Sbjct: 285 KRVLMISDDPSKINVEGGWLHY 306
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHHRTEM 454
+GKG++GV R+ K+LPR K KG RK IG+ P + + + GQ G+H RTE
Sbjct: 264 KGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEY 320
Query: 453 NKKIYRIGXRNPQKGWQ 403
NK+I +IG GW+
Sbjct: 321 NKRIIKIGI----NGWE 333
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQG 621
I++ GGT+ + + ++ G + VD VF + + ID IGVT+G
Sbjct: 223 IKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKG 265
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKG+ GV R+ +LPR K KG RK+ G S+T + GQ G+H RTE N
Sbjct: 222 KGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYN 279
Query: 450 KKIYRIGXR----NPQKGWQSY 397
K+I +IG NP G+ Y
Sbjct: 280 KRIIKIGDEPKEINPAGGFVRY 301
Score = 35.5 bits (78), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQG 621
IQ+ GG + Q + G+ I + VF + ++ID +GVT+G
Sbjct: 181 IQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKG 223
Score = 33.9 bits (74), Expect = 4.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 359 KSITPMGGFPHYGEVNNDFVMIQGLLHGT*K 267
K I P GGF YG V N +V+++G + G+ K
Sbjct: 290 KEINPAGGFVRYGIVRNTYVLLEGSILGSKK 320
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 36.7 bits (81), Expect = 0.70
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 627 GDTNAVNHFILGKHRIDRDRFSRCSLAHFTLSSNGTPVKLD 749
GD+N +NHFIL ++R++R+ F + +GT V LD
Sbjct: 54 GDSNDINHFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLD 94
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -3
Query: 240 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSRRRLTRLHSWVH 118
C C + G +R T +SLTP PS M SR R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_Q6AGQ9 Cluster: Putative uncharacterized protein; n=1;
Leifsonia xyli subsp. xyli|Rep: Putative uncharacterized
protein - Leifsonia xyli subsp. xyli
Length = 149
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 261 IRFLGPMQQPLDHHKVVVYFTIMGETSHRCNGFLRQIILS 380
+ LG +++P+D H FT+M +H NG LR ++L+
Sbjct: 79 VPILGWLEEPMDDHAYESAFTVMSIAAHSVNGRLRTVLLT 118
>UniRef50_Q9P0F5 Cluster: HSPC081; n=1; Homo sapiens|Rep: HSPC081 -
Homo sapiens (Human)
Length = 92
Score = 35.1 bits (77), Expect = 2.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 655 SWANTESTGIGSPDVLWPISLCP 723
SW N+ S G+G+P +LWP LCP
Sbjct: 26 SWPNSPSLGVGAPIILWP-GLCP 47
>UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;
n=31; Deuterostomia|Rep: Mitochondrial 39S ribosomal
protein L3 - Homo sapiens (Human)
Length = 348
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -3
Query: 621 GKGYKGVTSRWHTKKLPRKTH---KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 451
GKG++GV RW K P TH K R+ + RV G+ G +RTE
Sbjct: 212 GKGFQGVMKRWGFKGQP-ATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYG 270
Query: 450 KKIYRIGXRN 421
K++RI ++
Sbjct: 271 LKVWRINTKH 280
>UniRef50_Q2BFU2 Cluster: RTX toxins and related Ca2+-binding
protein; n=2; Bacillus sp. NRRL B-14911|Rep: RTX toxins
and related Ca2+-binding protein - Bacillus sp. NRRL
B-14911
Length = 1415
Score = 33.9 bits (74), Expect = 4.9
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 407 GKVIKNNASTEYD-LSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
G VI+ N D LS K++T MG EV NDF M ++HG
Sbjct: 299 GAVIEGNVKVSGDFLSLKNLTIMGDLEIAKEVENDFYMEDAIVHG 343
>UniRef50_UPI000051A196 Cluster: PREDICTED: similar to Toll-6
CG7250-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Toll-6 CG7250-PA - Apis mellifera
Length = 1218
Score = 33.5 bits (73), Expect = 6.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 403 LPSFLWIPXSNTIDFLVHFSTVM-ITFLTSTSYSERHPRRMPSSNAGNFP 549
+P L+ P SN + V ++ + IT L +ERHPRR S FP
Sbjct: 179 IPEHLFCPLSNLVTLNVSWNMLKDITELGFRDIAERHPRRQQESTTSPFP 228
>UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal
protein L3; n=2; Caenorhabditis|Rep: Putative
mitochondrial 39S ribosomal protein L3 - Caenorhabditis
elegans
Length = 403
Score = 33.1 bits (72), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 615 GYKGVTSRWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 439
G++G RW + P R+T K R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 438 RI 433
RI
Sbjct: 294 RI 295
>UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
tetani
Length = 209
Score = 33.1 bits (72), Expect = 8.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRK-THKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEMN 451
+GKGY+G+ RW+ + P K R V +G A +P+R AG G T +N
Sbjct: 115 KGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLN 174
Query: 450 KKIYR 436
++ +
Sbjct: 175 LEVVK 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,457,518
Number of Sequences: 1657284
Number of extensions: 17802847
Number of successful extensions: 44537
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 42880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44518
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -