Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B14
(815 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 126 3e-29
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 126 3e-29
04_04_1321 + 32634471-32634566,32635102-32635193,32635290-326355... 32 0.47
11_04_0146 - 14091671-14092357,14092996-14093229 31 1.4
04_04_0173 - 23294511-23294601,23294719-23294849,23295160-232954... 29 3.3
04_03_0845 - 20245836-20246046,20246137-20246219,20246330-202464... 29 4.4
12_02_0510 + 19846834-19848100,19848114-19848391 29 5.8
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 29 5.8
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 29 5.8
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 29 5.8
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 29 5.8
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 126 bits (303), Expect = 3e-29
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 444 IYRIG 430
+Y+IG
Sbjct: 285 VYKIG 289
Score = 86.2 bits (204), Expect = 3e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 137
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 84.6 bits (200), Expect = 8e-17
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYP 570
IQ+NGGTI + + G + + IPVD+VF +DEMID IGVT+G V G R P
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR-LP 242
Query: 569 VRHTRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVIKN 390
+ R L K+ + G R V TV + + ++KK K+ K+
Sbjct: 243 RKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMNKKVYKIGKS 291
Query: 389 N-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
A TE+D +EK ITPMGGFPHYG V D++MI+G G
Sbjct: 292 GQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 126 bits (303), Expect = 3e-29
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = -3
Query: 624 RGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 445
+GKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 444 IYRIG 430
+Y+IG
Sbjct: 285 VYKIG 289
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 84.6 bits (200), Expect = 8e-17
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Frame = -1
Query: 749 IQLNGGTIRGQSEMGQRTSGEPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYP 570
IQ+NGGTI + + G + + IPVD+VF +DEMID IGVT+G V G R P
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR-LP 242
Query: 569 VRHTRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKKDGKVIKN 390
+ R L K+ + G R V TV + + ++KK K+ K+
Sbjct: 243 RKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMNKKVYKIGKS 291
Query: 389 N-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIQGLLHG 276
A TE+D +EK ITPMGGFPHYG V D++MI+G G
Sbjct: 292 GQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
>04_04_1321 +
32634471-32634566,32635102-32635193,32635290-32635585,
32635665-32635863,32636019-32636223,32637001-32637093
Length = 326
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -2
Query: 775 RQKKXHIMESNLTGVPFEDKVKWAREHLENLSLSILCLPKMK*LTALVSPKGQRIQRCHF 596
R+K H + + GVP V A+ ++EN ++ +L PK K T S K R+Q+CH
Sbjct: 18 REKADHYT-TKIGGVPVHAPV--AKFNIENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHT 74
Query: 595 S 593
S
Sbjct: 75 S 75
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 618 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAW 523
K YK T RWH K++ K K KV +W
Sbjct: 266 KIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>04_04_0173 -
23294511-23294601,23294719-23294849,23295160-23295483,
23296016-23296147,23296225-23296373,23296536-23296670,
23296997-23297090,23297199-23297318,23298096-23298182,
23298273-23298386,23299089-23299270,23299960-23300023,
23300191-23300337,23300636-23300845,23301048-23301217,
23301355-23301477,23301589-23301661,23301765-23301857
Length = 812
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 772 QKKXHIMESNLTGVPFED--KVKWAREHLENLSLSILC 665
Q H+M+SN+ V +ED K+++A E L+ +L + C
Sbjct: 733 QHTRHLMDSNVLDVTYEDKQKLRFAFEQLKTKALQLNC 770
>04_03_0845 -
20245836-20246046,20246137-20246219,20246330-20246470,
20246561-20247421
Length = 431
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +3
Query: 573 VASLCANEK*HLCILCPLGDTNAVNHFILGKHRIDRDRFSRCSLAHFTLSS 725
VA LCA E HL + PL + LG+ R+ S L TLSS
Sbjct: 132 VALLCAPEWCHLALADPLLGCATLESLALGECRVSDRGASAARLTELTLSS 182
>12_02_0510 + 19846834-19848100,19848114-19848391
Length = 514
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -1
Query: 782 KTATKEGSHYGIQLNGGTIRGQSEMGQRTSGEPIPV-DSVFAQDEMIDCIGVTQGAKDTK 606
+ T G H Q N G I+ + + T PV +DE+I+ +GV +D+K
Sbjct: 154 RVVTGHGLHTSPQRNEGRIQDTTNRNETTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSK 213
Query: 605 VSL 597
+S+
Sbjct: 214 LSV 216
>12_02_0506 -
19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -1
Query: 782 KTATKEGSHYGIQLNGGTIRGQSEMGQRTSGEPIPV-DSVFAQDEMIDCIGVTQGAKDTK 606
+ T G H Q N G I+ + + T PV +DE+I+ +GV +D+K
Sbjct: 245 RVVTGHGLHTSPQRNEGRIQDTTNRNETTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSK 304
Query: 605 VSL 597
+S+
Sbjct: 305 LSV 307
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 618 KGYKGVTSRWHTKKLPRKTHKGLRKV 541
K YK T RWH K++ K K KV
Sbjct: 29 KIYKDKTKRWHDKRIKHKEFKAREKV 54
>03_05_0901 +
28635672-28636094,28637623-28637802,28637903-28638172,
28638506-28638757,28639205-28639453,28639533-28639606,
28639798-28639915,28640421-28640555,28640813-28640965
Length = 617
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 495 ARAGQKGYHHRTEMNKKIYRIGXRNPQ 415
+RA GY + +E N +IYR+ R+P+
Sbjct: 590 SRADNLGYEYMSEQNNEIYRLLLRDPK 616
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 788 AVKTATKEGSHYGIQLNGGTIRGQSEMGQRTSGEPIP-VD-SVFAQDEMIDCIGVTQGAK 615
A + +KE G G RG GQ + + I VD S+ QDE+ID +G K
Sbjct: 439 ATRNFSKE-CFIGEGFTGQVYRGDFPGGQLLAIKKINMVDLSLSEQDELIDMLGKMSNLK 497
Query: 614 DTKVSLLVG 588
+S LVG
Sbjct: 498 HPNISALVG 506
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,106,772
Number of Sequences: 37544
Number of extensions: 509169
Number of successful extensions: 1360
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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