BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_B08 (819 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 37 0.10 AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein. 37 0.10 D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 32 2.9 BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 32 2.9 BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 32 2.9 BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 32 2.9 AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 32 2.9 AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2 (Drosop... 31 3.8 AL359314-3|CAI10914.2| 2789|Homo sapiens KIAA0367 protein. 31 3.8 AL359314-2|CAI10915.2| 2383|Homo sapiens KIAA0367 protein. 31 3.8 AL161626-4|CAI39749.2| 2789|Homo sapiens KIAA0367 protein. 31 3.8 AL161626-3|CAI39750.2| 2383|Homo sapiens KIAA0367 protein. 31 3.8 AB050197-1|BAD93351.1| 2724|Homo sapiens BNIP2 motif containing ... 31 3.8 BC069233-1|AAH69233.1| 808|Homo sapiens SCY1-like 1 (S. cerevis... 31 6.6 BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein. 31 6.6 BC009967-1|AAH09967.2| 472|Homo sapiens SCYL1 protein protein. 31 6.6 AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific pept... 31 6.6 AL359074-6|CAM45725.2| 634|Homo sapiens ubiquitin specific pept... 31 6.6 AL359074-4|CAM45723.2| 357|Homo sapiens ubiquitin specific pept... 31 6.6 AB051428-1|BAB55459.1| 791|Homo sapiens kinase-like protein spl... 31 6.6 AB051427-1|BAB55458.1| 808|Homo sapiens kinase-like protein pro... 31 6.6 AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein. 31 6.6 AK128759-1|BAC87603.1| 140|Homo sapiens protein ( Homo sapiens ... 25 9.5 >AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. Length = 4169 Score = 36.7 bits (81), Expect = 0.10 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +1 Query: 250 WMTAVAPGSMDELYSGGGRCDGKNEMP-VSSRTIPQ-STPHGTYGTKYRGNRSPSADPEV 423 W + A ++ +G G D K E+P V S + PQ P Y + P +V Sbjct: 1018 WPDSYATEKALKVSTGPGPADQKTEIPAVQSSSYPQREKPSVLYPQVLSDSHLPEESLKV 1077 Query: 424 PNDPSDRDYRQSER--PSSVWSQMEEAGIWEPRPRDESSTPREA 549 P D PS+ +SQ E+ GI+ + ES P+EA Sbjct: 1078 SAFPGPADQMTDTPAVPSTFYSQREKPGIFYQQTLPESHLPKEA 1121 >AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein. Length = 2557 Score = 36.7 bits (81), Expect = 0.10 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +1 Query: 250 WMTAVAPGSMDELYSGGGRCDGKNEMP-VSSRTIPQ-STPHGTYGTKYRGNRSPSADPEV 423 W + A ++ +G G D K E+P V S + PQ P Y + P +V Sbjct: 1016 WPDSYATEKALKVSTGPGPADQKTEIPAVQSSSYPQREKPSVLYPQVLSDSHLPEESLKV 1075 Query: 424 PNDPSDRDYRQSER--PSSVWSQMEEAGIWEPRPRDESSTPREA 549 P D PS+ +SQ E+ GI+ + ES P+EA Sbjct: 1076 SAFPGPADQMTDTPAVPSTFYSQREKPGIFYQQTLPESHLPKEA 1119 >D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. Length = 911 Score = 31.9 bits (69), Expect = 2.9 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179 E E IP + +H + + PY + +S QR LP L+ N S T Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383 Query: 178 PERYDMSFFKRG-LW 137 PER+D+SFF G LW Sbjct: 384 PERWDVSFFTGGPLW 398 >BT009799-1|AAP88801.1| 911|Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa protein. Length = 911 Score = 31.9 bits (69), Expect = 2.9 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179 E E IP + +H + + PY + +S QR LP L+ N S T Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383 Query: 178 PERYDMSFFKRG-LW 137 PER+D+SFF G LW Sbjct: 384 PERWDVSFFTGGPLW 398 >BC020981-1|AAH20981.1| 911|Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa protein. Length = 911 Score = 31.9 bits (69), Expect = 2.9 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179 E E IP + +H + + PY + +S QR LP L+ N S T Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383 Query: 178 PERYDMSFFKRG-LW 137 PER+D+SFF G LW Sbjct: 384 PERWDVSFFTGGPLW 398 >BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. Length = 585 Score = 31.9 bits (69), Expect = 2.9 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179 E E IP + +H + + PY + +S QR LP L+ N S T Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383 Query: 178 PERYDMSFFKRG-LW 137 PER+D+SFF G LW Sbjct: 384 PERWDVSFFTGGPLW 398 >AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. Length = 534 Score = 31.9 bits (69), Expect = 2.9 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179 E E IP + +H + + PY + +S QR LP L+ N S T Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383 Query: 178 PERYDMSFFKRG-LW 137 PER+D+SFF G LW Sbjct: 384 PERWDVSFFTGGPLW 398 >AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2 (Drosophila) protein. Length = 803 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 743 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 801 >AL359314-3|CAI10914.2| 2789|Homo sapiens KIAA0367 protein. Length = 2789 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 444 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 502 >AL359314-2|CAI10915.2| 2383|Homo sapiens KIAA0367 protein. Length = 2383 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 64 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 122 >AL161626-4|CAI39749.2| 2789|Homo sapiens KIAA0367 protein. Length = 2789 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 444 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 502 >AL161626-3|CAI39750.2| 2383|Homo sapiens KIAA0367 protein. Length = 2383 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 64 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 122 >AB050197-1|BAD93351.1| 2724|Homo sapiens BNIP2 motif containing molecule at the carboxyl tarminal region 1 protein. Length = 2724 Score = 31.5 bits (68), Expect = 3.8 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = +1 Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483 +P+ +P ++P GT + + + RSP+A PE +P+D + P WS Sbjct: 384 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 442 >BC069233-1|AAH69233.1| 808|Homo sapiens SCY1-like 1 (S. cerevisiae) protein. Length = 808 Score = 30.7 bits (66), Expect = 6.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534 S+ D++ S+ P S WS E G WE ++ SS Sbjct: 679 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 711 >BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein. Length = 458 Score = 30.7 bits (66), Expect = 6.6 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Frame = +1 Query: 274 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 435 S EL+SG C E V + + +PH G + NR P +P V DP Sbjct: 287 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 344 >BC009967-1|AAH09967.2| 472|Homo sapiens SCYL1 protein protein. Length = 472 Score = 30.7 bits (66), Expect = 6.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534 S+ D++ S+ P S WS E G WE ++ SS Sbjct: 370 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 402 >AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific peptidase 54 protein. Length = 1684 Score = 30.7 bits (66), Expect = 6.6 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577 I D P+ PP Y +K FG P P+ K ARP ++Q P Sbjct: 614 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 652 >AL359074-6|CAM45725.2| 634|Homo sapiens ubiquitin specific peptidase 54 protein. Length = 634 Score = 30.7 bits (66), Expect = 6.6 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577 I D P+ PP Y +K FG P P+ K ARP ++Q P Sbjct: 411 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 449 >AL359074-4|CAM45723.2| 357|Homo sapiens ubiquitin specific peptidase 54 protein. Length = 357 Score = 30.7 bits (66), Expect = 6.6 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577 I D P+ PP Y +K FG P P+ K ARP ++Q P Sbjct: 174 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 212 >AB051428-1|BAB55459.1| 791|Homo sapiens kinase-like protein splice variant 1 protein. Length = 791 Score = 30.7 bits (66), Expect = 6.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534 S+ D++ S+ P S WS E G WE ++ SS Sbjct: 662 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 694 >AB051427-1|BAB55458.1| 808|Homo sapiens kinase-like protein protein. Length = 808 Score = 30.7 bits (66), Expect = 6.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534 S+ D++ S+ P S WS E G WE ++ SS Sbjct: 679 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 711 >AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein. Length = 490 Score = 30.7 bits (66), Expect = 6.6 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Frame = +1 Query: 274 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 435 S EL+SG C E V + + +PH G + NR P +P V DP Sbjct: 319 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 376 >AK128759-1|BAC87603.1| 140|Homo sapiens protein ( Homo sapiens cDNA FLJ45035 fis, clone BRAWH3019594. ). Length = 140 Score = 25.0 bits (52), Expect(2) = 9.5 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -2 Query: 674 CPVSESFGRQSQV 636 CPVSE+FGR S V Sbjct: 96 CPVSETFGRLSPV 108 Score = 23.8 bits (49), Expect(2) = 9.5 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 Query: 701 DTWGRHFERCPVSESFGR 648 +T+GR CPVSE+FGR Sbjct: 70 ETFGR---LCPVSETFGR 84 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 144,561,244 Number of Sequences: 237096 Number of extensions: 3789467 Number of successful extensions: 10547 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 9451 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10524 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10203625794 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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