BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B08
(819 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 37 0.10
AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein. 37 0.10
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 32 2.9
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 32 2.9
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 32 2.9
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 32 2.9
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 32 2.9
AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2 (Drosop... 31 3.8
AL359314-3|CAI10914.2| 2789|Homo sapiens KIAA0367 protein. 31 3.8
AL359314-2|CAI10915.2| 2383|Homo sapiens KIAA0367 protein. 31 3.8
AL161626-4|CAI39749.2| 2789|Homo sapiens KIAA0367 protein. 31 3.8
AL161626-3|CAI39750.2| 2383|Homo sapiens KIAA0367 protein. 31 3.8
AB050197-1|BAD93351.1| 2724|Homo sapiens BNIP2 motif containing ... 31 3.8
BC069233-1|AAH69233.1| 808|Homo sapiens SCY1-like 1 (S. cerevis... 31 6.6
BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein. 31 6.6
BC009967-1|AAH09967.2| 472|Homo sapiens SCYL1 protein protein. 31 6.6
AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific pept... 31 6.6
AL359074-6|CAM45725.2| 634|Homo sapiens ubiquitin specific pept... 31 6.6
AL359074-4|CAM45723.2| 357|Homo sapiens ubiquitin specific pept... 31 6.6
AB051428-1|BAB55459.1| 791|Homo sapiens kinase-like protein spl... 31 6.6
AB051427-1|BAB55458.1| 808|Homo sapiens kinase-like protein pro... 31 6.6
AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein. 31 6.6
AK128759-1|BAC87603.1| 140|Homo sapiens protein ( Homo sapiens ... 25 9.5
>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
Length = 4169
Score = 36.7 bits (81), Expect = 0.10
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = +1
Query: 250 WMTAVAPGSMDELYSGGGRCDGKNEMP-VSSRTIPQ-STPHGTYGTKYRGNRSPSADPEV 423
W + A ++ +G G D K E+P V S + PQ P Y + P +V
Sbjct: 1018 WPDSYATEKALKVSTGPGPADQKTEIPAVQSSSYPQREKPSVLYPQVLSDSHLPEESLKV 1077
Query: 424 PNDPSDRDYRQSER--PSSVWSQMEEAGIWEPRPRDESSTPREA 549
P D PS+ +SQ E+ GI+ + ES P+EA
Sbjct: 1078 SAFPGPADQMTDTPAVPSTFYSQREKPGIFYQQTLPESHLPKEA 1121
>AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein.
Length = 2557
Score = 36.7 bits (81), Expect = 0.10
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = +1
Query: 250 WMTAVAPGSMDELYSGGGRCDGKNEMP-VSSRTIPQ-STPHGTYGTKYRGNRSPSADPEV 423
W + A ++ +G G D K E+P V S + PQ P Y + P +V
Sbjct: 1016 WPDSYATEKALKVSTGPGPADQKTEIPAVQSSSYPQREKPSVLYPQVLSDSHLPEESLKV 1075
Query: 424 PNDPSDRDYRQSER--PSSVWSQMEEAGIWEPRPRDESSTPREA 549
P D PS+ +SQ E+ GI+ + ES P+EA
Sbjct: 1076 SAFPGPADQMTDTPAVPSTFYSQREKPGIFYQQTLPESHLPKEA 1119
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 31.9 bits (69), Expect = 2.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 178 PERYDMSFFKRG-LW 137
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.9 bits (69), Expect = 2.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 178 PERYDMSFFKRG-LW 137
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.9 bits (69), Expect = 2.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 178 PERYDMSFFKRG-LW 137
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 31.9 bits (69), Expect = 2.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 178 PERYDMSFFKRG-LW 137
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 31.9 bits (69), Expect = 2.9
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 349 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 179
E E IP + +H + + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 178 PERYDMSFFKRG-LW 137
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AL390239-3|CAO03468.1| 803|Homo sapiens prune homolog 2
(Drosophila) protein.
Length = 803
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 743 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 801
>AL359314-3|CAI10914.2| 2789|Homo sapiens KIAA0367 protein.
Length = 2789
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 444 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 502
>AL359314-2|CAI10915.2| 2383|Homo sapiens KIAA0367 protein.
Length = 2383
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 64 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 122
>AL161626-4|CAI39749.2| 2789|Homo sapiens KIAA0367 protein.
Length = 2789
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 444 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 502
>AL161626-3|CAI39750.2| 2383|Homo sapiens KIAA0367 protein.
Length = 2383
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 64 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 122
>AB050197-1|BAD93351.1| 2724|Homo sapiens BNIP2 motif containing
molecule at the carboxyl tarminal region 1 protein.
Length = 2724
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 325 MPVSSRTIPQSTPHGT------YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWS 483
+P+ +P ++P GT + + + RSP+A PE +P+D + P WS
Sbjct: 384 LPMEKSPLPNTSPQGTNHLIEDFASLWHSGRSPTAMPEPWGNPTDDGEPAAVAPFPAWS 442
>BC069233-1|AAH69233.1| 808|Homo sapiens SCY1-like 1 (S.
cerevisiae) protein.
Length = 808
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534
S+ D++ S+ P S WS E G WE ++ SS
Sbjct: 679 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 711
>BC028986-1|AAH28986.1| 458|Homo sapiens UBXD7 protein protein.
Length = 458
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +1
Query: 274 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 435
S EL+SG C E V + + +PH G + NR P +P V DP
Sbjct: 287 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 344
>BC009967-1|AAH09967.2| 472|Homo sapiens SCYL1 protein protein.
Length = 472
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534
S+ D++ S+ P S WS E G WE ++ SS
Sbjct: 370 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 402
>AL359074-7|CAO03506.1| 1684|Homo sapiens ubiquitin specific
peptidase 54 protein.
Length = 1684
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577
I D P+ PP Y +K FG P P+ K ARP ++Q P
Sbjct: 614 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 652
>AL359074-6|CAM45725.2| 634|Homo sapiens ubiquitin specific
peptidase 54 protein.
Length = 634
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577
I D P+ PP Y +K FG P P+ K ARP ++Q P
Sbjct: 411 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 449
>AL359074-4|CAM45723.2| 357|Homo sapiens ubiquitin specific
peptidase 54 protein.
Length = 357
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 446 IIDNPNGPPLYGVKWKKLVFGSPGPEMKAVLHARPDLCFIKQKP 577
I D P+ PP Y +K FG P P+ K ARP ++Q P
Sbjct: 174 IPDEPSKPPSYDIK-----FGGPSPQYKRWGPARPGSHLLEQHP 212
>AB051428-1|BAB55459.1| 791|Homo sapiens kinase-like protein splice
variant 1 protein.
Length = 791
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534
S+ D++ S+ P S WS E G WE ++ SS
Sbjct: 662 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 694
>AB051427-1|BAB55458.1| 808|Homo sapiens kinase-like protein
protein.
Length = 808
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 436 SDRDYRQSERPSSVWSQMEEAGIWEPRPRDESS 534
S+ D++ S+ P S WS E G WE ++ SS
Sbjct: 679 SNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSS 711
>AB018337-1|BAA34514.1| 490|Homo sapiens KIAA0794 protein protein.
Length = 490
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +1
Query: 274 SMDELYSGGGR----CDGKNEMPVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDP 435
S EL+SG C E V + + +PH G + NR P +P V DP
Sbjct: 319 SESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPVRTDP 376
>AK128759-1|BAC87603.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ45035 fis, clone BRAWH3019594. ).
Length = 140
Score = 25.0 bits (52), Expect(2) = 9.5
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 674 CPVSESFGRQSQV 636
CPVSE+FGR S V
Sbjct: 96 CPVSETFGRLSPV 108
Score = 23.8 bits (49), Expect(2) = 9.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 701 DTWGRHFERCPVSESFGR 648
+T+GR CPVSE+FGR
Sbjct: 70 ETFGR---LCPVSETFGR 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,561,244
Number of Sequences: 237096
Number of extensions: 3789467
Number of successful extensions: 10547
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10524
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -