Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B08
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 34 0.14
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 30 2.3
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 30 2.3
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 30 2.3
U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 29 4.0
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 5.3
Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical pr... 28 7.0
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 28 9.2
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 9.2
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 28 9.2
AC024876-12|AAF60896.2| 498|Caenorhabditis elegans Hypothetical... 28 9.2
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 697 LGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRL--LLYKAQVRPRVEYCFH 524
LG IS + F H + LA L N +Y T ++L LLYK +RPR+EY
Sbjct: 150 LGFLISEKLDFSEHWKKSINLAKFQLA--NIFNQYSTSNKKLMILLYKTFIRPRLEYGTV 207
Query: 523 LWAGAPKYQLLPFDSIQRRAVR 458
+ + K +S+Q R
Sbjct: 208 VSSPTKKSDEKAIESVQNAFTR 229
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 697 LGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRL--LLYKAQVRPRVEYCFH 524
LG IS + F H LA L N +Y T ++L LLYK +RPR+EY
Sbjct: 180 LGFLISEKLDFSDHWRKCINLAKFQLA--NMFNKYSTSNKKLMILLYKTFIRPRLEYGTV 237
Query: 523 LWAGAPKYQLLPFDSIQRRAVR 458
+ + K +S+Q R
Sbjct: 238 VSSPTKKSDEKTIESVQNAFTR 259
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -1
Query: 672 SSFGVIWKAKPSWRPKCWESSTERSGTSRLDKGFCFIKHKSGLAWSTAFISGPGLPNTSF 493
S+F ++ K +CW + G + +C I++ + + + + GP +
Sbjct: 36 SAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNNSNLPGPAIRENK- 94
Query: 492 FHLTPYRGGP---FGLS-IIPV*RIVWN 421
L Y+ P FGL+ +I + R++WN
Sbjct: 95 -ELKYYQWVPFILFGLAVVIYIPRVIWN 121
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -1
Query: 672 SSFGVIWKAKPSWRPKCWESSTERSGTSRLDKGFCFIKHKSGLAWSTAFISGPGLPNTSF 493
S+F ++ K +CW + G + +C I++ + + + + GP +
Sbjct: 36 SAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNNSNLPGPAIRENK- 94
Query: 492 FHLTPYRGGP---FGLS-IIPV*RIVWN 421
L Y+ P FGL+ +I + R++WN
Sbjct: 95 -ELKYYQWVPFILFGLAVVIYIPRVIWN 121
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -1
Query: 672 SSFGVIWKAKPSWRPKCWESSTERSGTSRLDKGFCFIKHKSGLAWSTAFISGPGLPNTSF 493
S+F ++ K +CW + G + +C I++ + + + + GP +
Sbjct: 36 SAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNNSNLPGPAIRENK- 94
Query: 492 FHLTPYRGGP---FGLS-IIPV*RIVWN 421
L Y+ P FGL+ +I + R++WN
Sbjct: 95 -ELKYYQWVPFILFGLAVVIYIPRVIWN 121
>U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical
protein C06A6.2a protein.
Length = 639
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 353 RALPMEHTVQNTEGTEVPPQTQRFQTIRQTGI--IDNPNGPPLYGVK 487
R+ +H T + P ++ Q + + I +DN NGPPL VK
Sbjct: 392 RSKKEDHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438
>U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical
protein C06A6.2b protein.
Length = 642
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 353 RALPMEHTVQNTEGTEVPPQTQRFQTIRQTGI--IDNPNGPPLYGVK 487
R+ +H T + P ++ Q + + I +DN NGPPL VK
Sbjct: 392 RSKKEDHAASTTSVLQAPNYSELKQMLEKNNILKVDNENGPPLKRVK 438
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Frame = -1
Query: 417 WVCGGTSVPSVFCTVCSMGSA-LRNCSR*YRHLVFTIAPPATGVEFIHTTWSHCGHPQCV 241
+ C T+ P+ V M SA L+NC+R T V+F T S + QC
Sbjct: 76 FACYTTATPTPAPVVPDMRSAALKNCARTCGLCCKTSDFDCPNVQFPRLTCSTITNEQCR 135
Query: 240 S---RGLFC-HVPSGYGMSSPPRCFPSAMTCPSSNEACG 136
S R + PS G + C M C + CG
Sbjct: 136 SSVWRTIIATDCPSACGFCNQGGCVDGVMDCANDLSICG 174
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 244 ALWMTAVAPGSMDELYSGGGRCDGKNE---MPVSSRTIPQSTPHGTYGTKYRGNRSPSAD 414
A+ A ++ GGGR G SS + S HG + +R +R P
Sbjct: 31 AILFLLFATSTLAIFIDGGGRGGGGGGGYYSHSSSSSSSSSEEHGHHRPPHRPHRPPHRP 90
Query: 415 PEVPNDPS----DRDYRQSERPSSVW 480
P P D + + ERP+ VW
Sbjct: 91 HRPPRPPPRPECDEGWLRFERPNGVW 116
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = -3
Query: 733 GVSLXXSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQ 554
GV + S ++ LG+ ++F H+ + LA + +A +P LYK
Sbjct: 967 GVPITPSSTVRDLGLITDCKLKFEHHIVKVSCLAMLRSKQILKAFSSNSPKFYAHLYKTY 1026
Query: 553 VRPRVEYCFHLWA 515
V P + YC ++A
Sbjct: 1027 VAPIMNYCSEVYA 1039
>Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical
protein R17.3 protein.
Length = 440
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -1
Query: 183 CFPSAMTCPSSNEACGEY*AVGSGLALXPGIAKVHGRXVTTHHQ 52
C+ + C N C V G+A P ++ +H T HQ
Sbjct: 21 CYQRRLCCAGRNNTCK---GVDDGIAHLPTVSTIHNEEAQTFHQ 61
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -1
Query: 327 HLVFTIAPPATGVEFIHTTWSHCGHPQCVSRGLFCHVPSGYGMSSPPRCFPSAMTCPSSN 148
H + + PA + HC QCV+R + H Y P C P M PS +
Sbjct: 264 HPLVLVVHPAPQAQCSPACQPHCSQ-QCVARLQYMHESQFYNHILEPSCRPDCM--PSCH 320
Query: 147 EAC 139
C
Sbjct: 321 VDC 323
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 387 QREPKSLRRPRGSKRSVRPGLSTIR 461
+RE KS +RPRG+ PG S++R
Sbjct: 520 KREGKSTKRPRGTSTGEIPGSSSLR 544
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 364 HGTYGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVW 480
HG + + GNR P P P D D+ RP VW
Sbjct: 743 HGGHHGGHHGNRPP---PRPTPKPCDDDWHAFYRPQGVW 778
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 270 WSHCGHPQCVSRGLFCH 220
WS C HP CV+ +F H
Sbjct: 12 WSRCVHPSCVAWVIFIH 28
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 255 HPQCVSRGLFCHVPSGYGMSSPPRCFPSAMT 163
HPQ V++ + HVP G +PP+ P+ T
Sbjct: 162 HPQIVNQPMHPHVPVGSQNYNPPQFVPAPPT 192
>AC024876-12|AAF60896.2| 498|Caenorhabditis elegans Hypothetical
protein Y94H6A.1 protein.
Length = 498
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -3
Query: 358 CSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPST 185
CS E F+ + F +TA HR+ +EP+ S V + L + I +++E PST
Sbjct: 332 CSAEWFQELSGLSFEAQTAVHRAISE--IMEPMDSLDVSIEELVLMKFIMMFSE-PST 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,362,579
Number of Sequences: 27780
Number of extensions: 531260
Number of successful extensions: 1519
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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