Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B08
(819 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56360.1 68414.m06481 calcineurin-like phosphoesterase family... 36 0.043
At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family... 33 0.30
At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4) ... 31 0.92
At5g58110.1 68418.m07271 expressed protein predicted proteins, H... 31 1.2
At3g22520.1 68416.m02846 expressed protein 31 1.2
At3g16200.1 68416.m02045 expressed protein 30 2.1
At4g23640.1 68417.m03404 potassium transporter / tiny root hair ... 29 2.8
At5g65670.2 68418.m08261 auxin-responsive protein / indoleacetic... 29 3.7
At5g65670.1 68418.m08260 auxin-responsive protein / indoleacetic... 29 3.7
At1g76320.1 68414.m08866 far-red impaired responsive protein, pu... 29 3.7
At4g25650.2 68417.m03694 Rieske [2Fe-2S] domain-containing prote... 29 4.9
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote... 29 4.9
At3g25070.1 68416.m03132 RPM1-interacting protein 4 (RIN4) ident... 28 6.5
At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 28 6.5
At5g26570.1 68418.m03152 glycoside hydrolase starch-binding doma... 28 8.6
At1g51590.1 68414.m05808 mannosyl-oligosaccharide 1,2-alpha-mann... 28 8.6
>At1g56360.1 68414.m06481 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 466
Score = 35.5 bits (78), Expect = 0.043
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = -2
Query: 725 PXXFREYWDTWGRHFERCPVSESF----GRQSQVGVQNAGSPQQSEAVLHAWTKAF-AL* 561
P + WDTWGR E C + F G V N G P + H + A+ A
Sbjct: 200 PNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQ 259
Query: 560 STSP 549
STSP
Sbjct: 260 STSP 263
>At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 466
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -2
Query: 725 PXXFREYWDTWGRHFERCPVSESF----GRQSQVGVQNAGSPQQSEAVLHAWTKAF-AL* 561
P + WD+WGR E C ++F G V N G P + +H + A+ A
Sbjct: 200 PNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASK 259
Query: 560 STSP 549
S SP
Sbjct: 260 SISP 263
>At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4)
identical to phytoalexin-deficient 4 protein
[Arabidopsis thaliana] GI:6457331; contains Pfam profile
PF01764: Lipase
Length = 541
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 418 EVPNDPSDRDYRQSERPSSVWSQMEEAGIWEPRPRDESSTPREAGLVLYKAKAF 579
+VP + Y + + + W+++E+A W R ESS P+ L+ K F
Sbjct: 432 KVPEECVRSRYASTTQDTCFWAKLEQAKEWLDEARKESSDPQRRSLLREKIVPF 485
>At5g58110.1 68418.m07271 expressed protein predicted proteins, Homo
sapiens and Drosophila melanogaster
Length = 196
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 352 QSTPHGT-YGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSVWSQMEEAGIWEPRPRDE 528
+ T G+ Y R S +A P +P S+ D + P+S+ S AG WE + +
Sbjct: 6 EKTKEGSSYRYWVREATSDAAPPPLPQKLSNNDVSLNTAPASLGSLWNRAGTWEEKSLTK 65
Query: 529 SSTPR 543
+T R
Sbjct: 66 WATDR 70
>At3g22520.1 68416.m02846 expressed protein
Length = 600
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 328 PVSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDPSDRDYRQSERPSSV 477
PV ++ P+STP G+ K +G +P+ P+ P + RQS R +S+
Sbjct: 251 PVEAK--PKSTPRGSSNKKKKGATTPATGPQSSTKP--KPSRQSGRRTSI 296
>At3g16200.1 68416.m02045 expressed protein
Length = 452
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 297 WRAVRW*KRDAGIISNNSSEHSPWNIRYKIQREPKSLRRPRGSKRSVRPG 446
W RW K D I S HS W +R + P PR ++ +R G
Sbjct: 173 WFMARWLKPDMMIESGAFKGHSTWVLRQAMPDTPMISLTPRHPEKYLRKG 222
>At4g23640.1 68417.m03404 potassium transporter / tiny root hair 1
protein (TRH1) identical to tiny root hair 1 protein
[Arabidopsis thaliana] gi|11181958|emb|CAC16137;
KUP/HAK/KT Transporter family member, PMID:11500563;
identical to cDNA mRNA for tiny root hair 1 protein
(trh1) GI:11181957
Length = 775
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 462 FGLSIIPV*RIVWN-LWVCGGTSVPSVFCTVCSMGSALRNCSR*YRHLVFTIAPPATGVE 286
+ L P +IV WV G +P + V + A+ C R RH+ F +
Sbjct: 358 YALGCFPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLA 417
Query: 285 FIHTTW 268
F+ TTW
Sbjct: 418 FV-TTW 422
>At5g65670.2 68418.m08261 auxin-responsive protein / indoleacetic
acid-induced protein 9 (IAA9) identical to SP|Q38827
Auxin-responsive protein IAA9 (Indoleacetic acid-induced
protein 9) {Arabidopsis thaliana}
Length = 336
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 331 VSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDPSDRDYRQS 459
V+ + +PQ+ P G T + P+A ++ P R YR++
Sbjct: 154 VTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKN 196
>At5g65670.1 68418.m08260 auxin-responsive protein / indoleacetic
acid-induced protein 9 (IAA9) identical to SP|Q38827
Auxin-responsive protein IAA9 (Indoleacetic acid-induced
protein 9) {Arabidopsis thaliana}
Length = 338
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 331 VSSRTIPQSTPHGTYGTKYRGNRSPSADPEVPNDPSDRDYRQS 459
V+ + +PQ+ P G T + P+A ++ P R YR++
Sbjct: 154 VTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKN 196
>At1g76320.1 68414.m08866 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 732
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 665 SESFGRQSQVGVQNAGSPQQSEAVL 591
SE+ G SQ G Q+ P+QS+AVL
Sbjct: 673 SETVGEGSQEGFQHVADPRQSQAVL 697
>At4g25650.2 68417.m03694 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 559
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 818 WFNSXPLXTQVWAFTAKXDPFVMAPQXPRSIPXXFREYWDTWGRHFERC 672
WFN W K DPF++ P PR F YW H E C
Sbjct: 443 WFNKYSEARVDWR--GKFDPFLLPPTPPRE--QLFDRYWS----HVENC 483
>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 536
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 818 WFNSXPLXTQVWAFTAKXDPFVMAPQXPRSIPXXFREYWDTWGRHFERC 672
WFN W K DPF++ P PR F YW H E C
Sbjct: 420 WFNKYSEARVDWR--GKFDPFLLPPTPPRE--QLFDRYWS----HVENC 460
>At3g25070.1 68416.m03132 RPM1-interacting protein 4 (RIN4)
identical to SP|Q8GYN5 RPM1-interacting protein 4
{Arabidopsis thaliana}
Length = 211
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 352 QSTPHGTYGTKYRGNRSPSADPEVPNDPSDRDYRQSERP 468
++ P+ Y K R R+P + PNDP QS+ P
Sbjct: 16 ENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAP 54
>At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family
protein
Length = 883
Score = 28.3 bits (60), Expect = 6.5
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Frame = +1
Query: 235 SGNALWMTAVAPGSMDELYSGGGRCDGKNEMPVSS----RTIPQSTPHGTYGTKYRGNRS 402
SGN + G+ L GGG G N + + +P P G +GT N
Sbjct: 682 SGNPAAYAHPSNGNSYVLMPGGGSHLGSNGVKYGIHQQYKPVPTGGPAG-FGTYNNPNGY 740
Query: 403 PSADPEVPNDPSDRD--YRQSERPSSVW---SQMEEAGIWEPRPRDESS 534
P+ P V + + + R + +++ Q E + IW PRD SS
Sbjct: 741 PTNPPNVVGNATGLEDPSRMINKHGNIYVPNPQAETSEIWMQNPRDLSS 789
>At5g26570.1 68418.m03152 glycoside hydrolase starch-binding
domain-containing protein similar to SEX1 (starch
excess) [Arabidopsis thaliana] GI:12044358; contains
Pfam profile PF00686: Starch binding domain
Length = 1191
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -1
Query: 654 WKAKP--SWRPKCWESSTERSGTSRLDKGFCFIKHKSGLAWSTAFISGPGLPNTSFF 490
WK K +W W E G L+ F +K+ L+W + +PN+ F
Sbjct: 102 WKKKSPLNWSENGWVCELELDGGQVLEYKFVIVKNDGSLSWESGDNRVLKVPNSGNF 158
>At1g51590.1 68414.m05808 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 560
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 391 GNRSPSADPEVPNDPSDRDYRQSERPSSV--WSQMEEA--GIWEPRPRDESSTPREAGL 555
GN+ + P DP D+ RQ + + + WS E+ G E +PR + T GL
Sbjct: 78 GNKPLKTLKDAPEDPVDKQRRQKVKEAMIHAWSSYEKYAWGKDELQPRTKDGTDSFGGL 136
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,660,447
Number of Sequences: 28952
Number of extensions: 506776
Number of successful extensions: 1456
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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