Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B02
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 169 2e-42
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 169 2e-42
11_04_0146 - 14091671-14092357,14092996-14093229 31 1.4
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 29 5.7
04_01_0592 + 7808821-7809210 29 5.7
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.6
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.6
06_01_0604 - 4358278-4358442,4358835-4358943,4359236-4359331,435... 28 10.0
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 169 bits (411), Expect = 2e-42
Identities = 84/165 (50%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Frame = -2
Query: 769 KXAHIMESNLXGYHRGQS-EMSQRTFWRNLSLSILCLPKMK*LTALVSXKGKGYKGVTSR 593
K AH+ME + G + + F + + + + K + + + KGKGY+GV +R
Sbjct: 177 KKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMIDIIGVTKGKGYEGVVTR 235
Query: 592 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 413
W +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----K 290
Query: 412 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 291 SGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 86.2 bits (204), Expect = 3e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -3
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 139
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 169 bits (411), Expect = 2e-42
Identities = 84/165 (50%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Frame = -2
Query: 769 KXAHIMESNLXGYHRGQS-EMSQRTFWRNLSLSILCLPKMK*LTALVSXKGKGYKGVTSR 593
K AH+ME + G + + F + + + + K + + + KGKGY+GV +R
Sbjct: 177 KKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMIDIIGVTKGKGYEGVVTR 235
Query: 592 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 413
W +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----K 290
Query: 412 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 291 SGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -3
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 619 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAW 524
K YK T RWH K++ K K KV +W
Sbjct: 266 KIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 619 KGYKGVTSRWHTKKLPRKTHKGLRKV 542
K YK T RWH K++ K K KV
Sbjct: 29 KIYKDKTKRWHDKRIKHKEFKAREKV 54
>04_01_0592 + 7808821-7809210
Length = 129
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 631 SXKGKGYKGVTSRWHTKKLPRKTHKGLRKV 542
S K YK T RWH K++ K K L KV
Sbjct: 25 SHNAKIYKERTKRWHDKRIKIKKFKPLDKV 54
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -2
Query: 517 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 368
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 367 SEKSITPMGGFPHYGEVNN 311
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGLHLRL 60
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
>06_01_0604 -
4358278-4358442,4358835-4358943,4359236-4359331,
4359823-4359956,4360639-4360905,4361225-4361310,
4361409-4361501,4361601-4361696,4361986-4362093,
4362473-4362493,4363856-4364156
Length = 491
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +1
Query: 625 WXTPMQSIISSWANTESTGIGFSRMFSGSFHFXLDG-----TPXSW 747
W QSI++SW S G + G FH DG P SW
Sbjct: 97 WLNGGQSIVTSWPGCSSIAYGVAEEV-GPFHVNADGQGVHLNPYSW 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,331,682
Number of Sequences: 37544
Number of extensions: 452720
Number of successful extensions: 1225
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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