Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A24
(1139 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 45 1e-04
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 34 0.24
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 33 0.56
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 1.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.3
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 31 1.7
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 4.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 4.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 5.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 9.2
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 44.8 bits (101), Expect = 1e-04
Identities = 42/145 (28%), Positives = 43/145 (29%)
Frame = +1
Query: 415 PTXTXXPHAXEXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXDXXNNXHHK 594
P T P PP + TPP T P TP P TT P K
Sbjct: 55 PPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT---------K 105
Query: 595 XRTXTPPQXXQTNXQKPXKQPXXXETXXTXXXGXXKRXXQPATXXTTTKXXXXNXQTXXX 774
T TPP T KP T T T TTT T
Sbjct: 106 PTTTTPP--ATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPT 163
Query: 775 TTXXPQTXTQXXPXXXTTNTPQXXT 849
TT P T T P TT TP T
Sbjct: 164 TTTPPATTT---PTKSTTTTPPATT 185
Score = 39.1 bits (87), Expect = 0.006
Identities = 36/137 (26%), Positives = 39/137 (28%)
Frame = +1
Query: 391 PXRXXHXQPTXTXXPHAXEXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXD 570
P + + P T P PP + TPP T P P P TT P
Sbjct: 61 PTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT-- 118
Query: 571 XXNNXHHKXRTXTPPQXXQTNXQKPXKQPXXXETXXTXXXGXXKRXXQPATXXTTTKXXX 750
K T TPP T KP T T T TTT
Sbjct: 119 -------KPTTTTPP--GTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPA 169
Query: 751 XNXQTXXXTTXXPQTXT 801
T TT P T T
Sbjct: 170 TTTPTKSTTTTPPATTT 186
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 36.3 bits (80), Expect = 0.046
Identities = 26/98 (26%), Positives = 30/98 (30%), Gaps = 2/98 (2%)
Frame = +3
Query: 348 PXXTXXPKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXP-SXNPXKXNPPXH 524
P P P + P P P P P + P PP P + P NPP +
Sbjct: 98 PYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP-Y 156
Query: 525 TTPXXXTXHNXPQXRXXKQXPPQKXNXNTP-PXXXNKP 635
P N P PP N P P N P
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPP 194
Score = 32.7 bits (71), Expect = 0.56
Identities = 23/101 (22%), Positives = 28/101 (27%), Gaps = 3/101 (2%)
Frame = +3
Query: 240 PXPRDPRAQXXPXXXGXXKNPXXXXXX--FFXKXXXXXPXXTXXPKPXHXPXPTPXXPXP 413
P P P A P P + P P P + P P P P P
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP 190
Query: 414 THXXXXPXRXGXSXPPXXXXRQXXP-SXNPXKXNPPXHTTP 533
+ P + PP P + NP PP P
Sbjct: 191 PNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP 231
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKP 514
PP PNPP PP P P P P P P
Sbjct: 181 PPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPP 225
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 33.9 bits (74), Expect = 0.24
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +3
Query: 372 PXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNP---PXHTTPXXX 542
P P TP P+H P + PP P P P P HT P
Sbjct: 410 PVSTPSHTPPVSTPSHTP--PVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVST 467
Query: 543 TXHNXPQXRXXKQXPPQKXNXNTPP 617
H P PP NTPP
Sbjct: 468 PSHTPP-VSTPSHTPPVSTPSNTPP 491
Score = 32.3 bits (70), Expect = 0.75
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +3
Query: 372 PXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNP---PXHTTPXXX 542
P P TP P+H P PP P P P P HT P
Sbjct: 374 PVSTPSNTPPVSTPSHTP--PVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVS- 430
Query: 543 TXHNXPQXRXXKQXPPQKXNXNTPP 617
T N P PP +TPP
Sbjct: 431 TPSNTPPVSTPSHTPPVSTPSHTPP 455
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 32.7 bits (71), Expect = 0.56
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +3
Query: 366 PKPXHXPX-PTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXX 542
PKP + P P P P P R PS NP NP P
Sbjct: 563 PKPNNPASNPKPNNPSSNPKSNNPSSNPKPNNPSSNPRPNNPSSNPKPNNPXXXXNPSSN 622
Query: 543 TXHNXPQXRXXKQXPPQKXNXNTP 614
N P P N+P
Sbjct: 623 PKPNNPSSNPKPNNPSSNPKSNSP 646
Score = 32.3 bits (70), Expect = 0.75
Identities = 31/150 (20%), Positives = 46/150 (30%), Gaps = 1/150 (0%)
Frame = +3
Query: 366 PKPXHXPX-PTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXX 542
PKP + P P P P P + PS NP NP + P
Sbjct: 482 PKPNNPSSNPKPNNPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNP 541
Query: 543 TXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTAQXTXNXXDRXXGGXQTXXTTSH 722
+ + P P + P + P ++ N + +S+
Sbjct: 542 SSNPKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSSNPKSN---NPSSNPKPNNPSSN 598
Query: 723 XXHNHQTXRXKPXNXXXHXXXPTNXXPRXP 812
N+ + KP N +N P P
Sbjct: 599 PRPNNPSSNPKPNNPXXXXNPSSNPKPNNP 628
Score = 31.9 bits (69), Expect = 0.99
Identities = 35/170 (20%), Positives = 50/170 (29%), Gaps = 6/170 (3%)
Frame = +3
Query: 366 PKPXHXPX-PTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNP---PXHTTP 533
PKP + P P P P P + PS NP NP P P
Sbjct: 545 PKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSSNPKSNNPSSNPKPNNPSSNPRPNNP 604
Query: 534 XXXTXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTAQXTXNXXDRXXGGXQTXXT 713
N P P+ N ++ P N + + + +
Sbjct: 605 SSNPKPNNPXXXXNPSSNPKPNNPSSNPKPNNPSSNPKSNSPASNPKSNNPSSNPKPNNP 664
Query: 714 TSHXXHNHQTXRXKPXNXXXHXXXPTN--XXPRXPRXXNNKHPTAXXXQP 857
S+ N+ + KP N + P N P+ +N P P
Sbjct: 665 ASNPKPNNPSSNPKPNNPSSN-PKPNNPASNPKPNNPASNPKPNNPSSNP 713
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 32.3 bits (70), Expect = 0.75
Identities = 23/92 (25%), Positives = 25/92 (27%), Gaps = 2/92 (2%)
Frame = +3
Query: 366 PKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXX--RQXXPSXNPXKXNPPXHTTPXX 539
P P P P P P S PP PS P + PP P
Sbjct: 1020 PGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP 1079
Query: 540 XTXHNXPQXRXXKQXPPQKXNXNTPPXXXNKP 635
T P R P + PP KP
Sbjct: 1080 STSQPVPPPRQPDPIPTNPAHPTEPPPRQPKP 1111
Score = 31.9 bits (69), Expect = 0.99
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = +3
Query: 348 PXXTXXPKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHT 527
P P P P P P P P P P +P NP T
Sbjct: 1043 PPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPT 1102
Query: 528 TPXXXTXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTA 656
P P R Q PP KP + TA
Sbjct: 1103 EPPPRQPKPTPAPRPRSWVESQPELHRPPPPIKPKPCQKFKTA 1145
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP P PP PP P P P PA P P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP + P PP PP + P P P P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP + P PP PP +P P P P P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 410 PNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
P PP PP + P P P P Q P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP + P PP PP P P P P P P P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP P PP PP P P P P P P P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP + P PP PP P P P P P P P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP + P PP PP + P P P P K + P P
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIP 252
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXPT 523
PP A TPNPP P T TP P PA P P+
Sbjct: 233 PPNPSKAIATPNPPMP--ETPLPPATPNPFIPPASPNPSIPPAPPNPS 278
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/102 (23%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Frame = +3
Query: 366 PKPXHXPXPTPXX----PXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTP 533
P H P P P P P + + PP R P+ P + PP
Sbjct: 198 PHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPL-PAPPPGENRPPPPMR- 255
Query: 534 XXXTXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTAQ 659
T P PP++ + N PP P T Q
Sbjct: 256 -GPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQ 296
Score = 28.7 bits (61), Expect = 9.2
Identities = 21/93 (22%), Positives = 26/93 (27%), Gaps = 2/93 (2%)
Frame = +3
Query: 384 PXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXTXHNXPQ 563
P P P P P PP P P + P P T P
Sbjct: 264 PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPP 323
Query: 564 XRXXKQXPPQ--KXNXNTPPXXXNKPXKTXXTA 656
R PP + PP +KP + +A
Sbjct: 324 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSA 356
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/102 (23%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Frame = +3
Query: 366 PKPXHXPXPTPXX----PXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTP 533
P H P P P P P + + PP R P+ P + PP
Sbjct: 110 PHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPL-PAPPPGENRPPPPMR- 167
Query: 534 XXXTXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTAQ 659
T P PP++ + N PP P T Q
Sbjct: 168 -GPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQ 208
Score = 28.7 bits (61), Expect = 9.2
Identities = 21/93 (22%), Positives = 26/93 (27%), Gaps = 2/93 (2%)
Frame = +3
Query: 384 PXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXTXHNXPQ 563
P P P P P PP P P + P P T P
Sbjct: 176 PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPP 235
Query: 564 XRXXKQXPPQ--KXNXNTPPXXXNKPXKTXXTA 656
R PP + PP +KP + +A
Sbjct: 236 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSA 268
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 347 PXXXXTXKAXXPPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXPTH 526
P A PP P P PP P P P PA Q P Q P P H
Sbjct: 55 PSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPA--QPAP-QPPPAPPH 111
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP P PP PP P P P P P P P
Sbjct: 702 PPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPP 748
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +3
Query: 348 PXXTXXPKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHT 527
P P P TP P PT+ P PP P P PP
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPP 408
Query: 528 TP 533
P
Sbjct: 409 PP 410
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.1 bits (62), Expect = 7.0
Identities = 28/140 (20%), Positives = 40/140 (28%), Gaps = 7/140 (5%)
Frame = +3
Query: 366 PKPXHXPX-PTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNP---PXHTTP 533
PKP + P P P P P + PS NP NP P P
Sbjct: 80 PKPNNPASNPKPNNPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNP 139
Query: 534 XXXTXHNXPQXRXXKQXP---PQKXNXNTPPXXXNKPXKTXXTAQXTXNXXDRXXGGXQT 704
N P P P+ N ++ P N + + +
Sbjct: 140 SSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKP 199
Query: 705 XXTTSHXXHNHQTXRXKPXN 764
+S+ N+ + KP N
Sbjct: 200 NNPSSNPKSNNPSSNPKPNN 219
Score = 29.1 bits (62), Expect = 7.0
Identities = 25/134 (18%), Positives = 39/134 (29%), Gaps = 1/134 (0%)
Frame = +3
Query: 366 PKPXHXPX-PTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXX 542
PKP + P P P P P + PS NP NP + P
Sbjct: 116 PKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNP 175
Query: 543 TXHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTAQXTXNXXDRXXGGXQTXXTTSH 722
+ + P P + P + P ++ N + +S+
Sbjct: 176 SSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSSNPKPN---NPSSNPKPNNPSSN 232
Query: 723 XXHNHQTXRXKPXN 764
N+ + KP N
Sbjct: 233 PKSNNPSSNPKPNN 246
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKP 499
PP T A P PP PP P P P PA P
Sbjct: 128 PPPTSPATRAP-PPPPPIAPATGGPPPPPPIAPATGGPPP 166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.123 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,779,845
Number of Sequences: 59808
Number of extensions: 127484
Number of successful extensions: 872
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3509788328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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